Difference between revisions of "TSS:Mm 99949.1"
From referenceTSS
| (2 intermediate revisions by the same user not shown) | |||
| Line 2: | Line 2: | ||
|Kcnf1= | |Kcnf1= | ||
|Kir2.1= | |Kir2.1= | ||
| − | |all_trans= | + | |all_trans=MGI:3650970 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| Line 11: | Line 11: | ||
|entrez_id=16518 | |entrez_id=16518 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
| − | |gene_alias=IRK1 | + | |gene_alias=IRK1{{!}}Kcnf1{{!}}Kir2.1 |
| − | |gene_description= | + | |gene_description=potassium inwardly-rectifying channel, subfamily J, member 2 |
|gene_id= | |gene_id= | ||
|gene_name=predicted gene 11675 | |gene_name=predicted gene 11675 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_008425 | |nearest_refseq=NM_008425 | ||
|nearest_unigene=Mm.4951 | |nearest_unigene=Mm.4951 | ||
| − | |num_trans= | + | |num_trans= |
|species=mouse | |species=mouse | ||
|start=111276053 | |start=111276053 | ||
| Line 30: | Line 30: | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000121873.1 | |transcript_name=ENSMUST00000121873.1 | ||
| − | |tss_classification= | + | |tss_classification=yes |
|tss_id=mm_99949.1 | |tss_id=mm_99949.1 | ||
|tss_score=1 | |tss_score=1 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Latest revision as of 19:37, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 111276065 |
|---|---|
| End of the center position in the TSS region: | 111276066 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000121873.1 |
|---|---|
| Distance: | 22 |
| Num_trans: | |
| All_trans: | MGI:3650970 |
TATA-Box annotation
| Distance to TSS: | 209902 |
|---|---|
| Nearest PromoterID: | NM_008425 |
| Entrez ID: | 16518 |
| Nearest Unigene: | Mm.4951 |
| Nearest Refseq: | NM_008425 |
| Nearest Ensembl: | ENSMUSG00000041695 |
| Gene Name: | predicted gene 11675 |
| Gene Alias: | IRK1|Kcnf1|Kir2.1 |
| Gene Description: | potassium inwardly-rectifying channel, subfamily J, member 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
