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Difference between revisions of "TSS:Mm 99954.1"

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{{TSSDetail
 
{{TSSDetail
|all_trans=ENSMUST00000153429.1:0 AK017060:0 ENSMUST00000149136.1:-10 AK015526:-10
+
|all_trans=MGI:1918453
 
|chr=chr11
 
|chr=chr11
 
|cpg_percent=0
 
|cpg_percent=0
Line 22: Line 22:
 
|nearest_refseq=NR_130164
 
|nearest_refseq=NR_130164
 
|nearest_unigene=Mm.86795
 
|nearest_unigene=Mm.86795
|num_trans=4
+
|num_trans=71203
 
|species=mouse
 
|species=mouse
 
|start=112825163
 
|start=112825163

Latest revision as of 19:37, 28 July 2021

Basic information about the TSS


TSS ID:mm_99954.1
Species:mouse
Chr:chr11
TSS Classification:no
Start:112825163
End:112825190
Strand:+
TSS Score:1
Start of the center position in the TSS region:112825176
End of the center position in the TSS region:112825177



Gene and protein annotation


Transcript_name:ENSMUST00000153429.1 AK017060
Distance:0
GeneID:71203
HGNC/MGI_ID:MGI:1918453
UniProt_ID:Q9D3U1
Gene_name:RIKEN cDNA 4933434M16 gene
Gene_symbol:4933434M16Rik
Gene_synonyms:
Gene_source:MGI:1918453



Transcript annotation


Transcript_name:ENSMUST00000153429.1 AK017060
Distance:0
Num_trans:71203
All_trans:MGI:1918453



TATA-Box annotation


Distance to TSS:-49
Nearest PromoterID:NR_130164
Entrez ID:76393
Nearest Unigene:Mm.86795
Nearest Refseq:NR_130164
Nearest Ensembl:
Gene Name:RIKEN cDNA 4933434M16 gene
Gene Alias:-
Gene Description:RIKEN cDNA 1700012H19 gene
Gene Type:ncRNA
CpG%:0
GC%:0.462687
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):