Difference between revisions of "TSS:Mm 99954.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000153429.1:0 AK017060:0 ENSMUST00000149136.1:-10 uc007meg.1:-10 AK015526:-10 |chr=chr11 |cpg_percent=0 |distance=0 |distance_to_tss=-49 |end=1...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:1918453 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-49 | |distance_to_tss=-49 | ||
|end=112825190 | |end=112825190 | ||
| + | |end_of_center_position=112825177 | ||
|entrez_id=76393 | |entrez_id=76393 | ||
|gc_percent=0.462687 | |gc_percent=0.462687 | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NR_130164 | |nearest_refseq=NR_130164 | ||
|nearest_unigene=Mm.86795 | |nearest_unigene=Mm.86795 | ||
| − | |num_trans= | + | |num_trans=71203 |
|species=mouse | |species=mouse | ||
|start=112825163 | |start=112825163 | ||
| + | |start_of_center_position=112825176 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000153429.1 AK017060 | |transcript_name=ENSMUST00000153429.1 AK017060 | ||
| Line 29: | Line 31: | ||
|tss_id=mm_99954.1 | |tss_id=mm_99954.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q9D3U1 |
}} | }} | ||
Latest revision as of 19:37, 28 July 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 112825176 |
|---|---|
| End of the center position in the TSS region: | 112825177 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000153429.1 AK017060 |
|---|---|
| Distance: | 0 |
| Num_trans: | 71203 |
| All_trans: | MGI:1918453 |
TATA-Box annotation
| Distance to TSS: | -49 |
|---|---|
| Nearest PromoterID: | NR_130164 |
| Entrez ID: | 76393 |
| Nearest Unigene: | Mm.86795 |
| Nearest Refseq: | NR_130164 |
| Nearest Ensembl: | |
| Gene Name: | RIKEN cDNA 4933434M16 gene |
| Gene Alias: | - |
| Gene Description: | RIKEN cDNA 1700012H19 gene |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.462687 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
