Difference between revisions of "TSS:Mm 99960.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC063056:-31 AF109377:-32 AK152464:-39 AK171574:-43 AK220387:-46 AK159497:-48 NM_013581:-49 uc007mer.2:-49 uc011yhb.1:-49 AK162971:-49 AK034636:-49 ENSM...") |
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |Ldlb= |
| + | |all_trans=MGI:1333873 | ||
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=52 | |distance_to_tss=52 | ||
|end=113649584 | |end=113649584 | ||
| + | |end_of_center_position=113649581 | ||
|entrez_id=16834 | |entrez_id=16834 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=6030445I15 | + | |gene_alias=6030445I15{{!}}Ldlb{{!}}mKIAA1381 |
|gene_description=component of oligomeric golgi complex 1 | |gene_description=component of oligomeric golgi complex 1 | ||
|gene_id=16834 | |gene_id=16834 | ||
| Line 17: | Line 19: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:1333873 | |hgnc_mgi_id=MGI:1333873 | ||
| + | |mKIAA1381= | ||
|nearest_ensembl=ENSMUSG00000018661 | |nearest_ensembl=ENSMUSG00000018661 | ||
|nearest_promoter_id=NM_013581 | |nearest_promoter_id=NM_013581 | ||
|nearest_refseq=NM_013581 | |nearest_refseq=NM_013581 | ||
|nearest_unigene=Mm.261620 | |nearest_unigene=Mm.261620 | ||
| − | |num_trans= | + | |num_trans=16834 |
|species=mouse | |species=mouse | ||
|start=113649577 | |start=113649577 | ||
| + | |start_of_center_position=113649580 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC063056 | |transcript_name=BC063056 | ||
Latest revision as of 19:37, 28 July 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 113649580 |
|---|---|
| End of the center position in the TSS region: | 113649581 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC063056 |
|---|---|
| Distance: | -31 |
| Num_trans: | 16834 |
| All_trans: | MGI:1333873 |
TATA-Box annotation
| Distance to TSS: | 52 |
|---|---|
| Nearest PromoterID: | NM_013581 |
| Entrez ID: | 16834 |
| Nearest Unigene: | Mm.261620 |
| Nearest Refseq: | NM_013581 |
| Nearest Ensembl: | ENSMUSG00000018661 |
| Gene Name: | component of oligomeric golgi complex 1 |
| Gene Alias: | 6030445I15|Ldlb|mKIAA1381 |
| Gene Description: | component of oligomeric golgi complex 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
