Difference between revisions of "TSS:Mm 9997.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000067976.8:4 NM_144880:4 uc007eci.1:4 AK145397:4 BC059026:4 |chr=chr1 |cpg_percent=0.11 |distance=4 |distance_to_tss=-12 |end=191397061 |entre...") |
|||
| (2 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=MGI:2388479 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| Line 6: | Line 6: | ||
|distance_to_tss=-12 | |distance_to_tss=-12 | ||
|end=191397061 | |end=191397061 | ||
| + | |end_of_center_position=191397053 | ||
|entrez_id=226849 | |entrez_id=226849 | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=PR61alpha | |gene_alias=PR61alpha | ||
| − | |gene_description= | + | |gene_description=protein phosphatase 2, regulatory subunit B', alpha |
|gene_id=226849 | |gene_id=226849 | ||
| − | |gene_name= | + | |gene_name=protein phosphatase 2, regulatory subunit B', alpha |
|gene_source=MGI:2388479 | |gene_source=MGI:2388479 | ||
|gene_symbol=Ppp2r5a | |gene_symbol=Ppp2r5a | ||
| Line 21: | Line 22: | ||
|nearest_refseq=NM_144880 | |nearest_refseq=NM_144880 | ||
|nearest_unigene=Mm.205569 | |nearest_unigene=Mm.205569 | ||
| − | |num_trans= | + | |num_trans=226849 |
|species=mouse | |species=mouse | ||
|start=191397044 | |start=191397044 | ||
| + | |start_of_center_position=191397052 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000067976.8 | + | |transcript_name=ENSMUST00000067976.8 AK145397 BC059026 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_9997.1 | |tss_id=mm_9997.1 | ||
Latest revision as of 19:37, 28 July 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 191397052 |
|---|---|
| End of the center position in the TSS region: | 191397053 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000067976.8 AK145397 BC059026 |
|---|---|
| Distance: | 4 |
| Num_trans: | 226849 |
| All_trans: | MGI:2388479 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_144880 |
| Entrez ID: | 226849 |
| Nearest Unigene: | Mm.205569 |
| Nearest Refseq: | NM_144880 |
| Nearest Ensembl: | ENSMUSG00000026626 |
| Gene Name: | protein phosphatase 2, regulatory subunit B', alpha |
| Gene Alias: | PR61alpha |
| Gene Description: | protein phosphatase 2, regulatory subunit B', alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
