Difference between revisions of "TSS:Hg 233277.1"
From referenceTSS
| Line 28: | Line 28: | ||
|strand=- | |strand=- | ||
|tss_score=0 | |tss_score=0 | ||
| + | |tss_classification=0 | ||
|tata_box=-93(CTGTTTTAAAAG,-,0.00),-92(TGTTTTAAAAGC,-,0.00),-91(GTTTTAAAAGCA,+,0.00) | |tata_box=-93(CTGTTTTAAAAG,-,0.00),-92(TGTTTTAAAAGC,-,0.00),-91(GTTTTAAAAGCA,+,0.00) | ||
|transcript_name=NR_024540 | |transcript_name=NR_024540 | ||
|uniprot_id= | |uniprot_id= | ||
}} | }} | ||
Revision as of 14:18, 21 February 2018
Basic information about the TSS
|
Gene and protein annotation
|
Transcript annotation
| Transcript_name: | NR_024540 |
|---|---|
| Distance: | -4 |
| Num_trans: | 0 |
| All_trans: | :NR_024540:-4 ENST00000488147.1:-204 |
TATA-Box annotation
| Distance to TSS: | 20585 |
|---|---|
| Nearest PromoterID: | NM_008410 |
| Entrez ID: | 16432 |
| Nearest Unigene: | Mm.4266 |
| Nearest Refseq: | NM_008410 |
| Nearest Ensembl: | ENSMUSG00000022108 |
| Gene Name: | Itm2b |
| Gene Alias: | AI256040,Bri,Bri2,Bricd2b,D14Sel6,E25BMM,imBRI2 |
| Gene Description: | integral membrane protein 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -93(CTGTTTTAAAAG,-,0.00),-92(TGTTTTAAAAGC,-,0.00),-91(GTTTTAAAAGCA,+,0.00) |
