Difference between revisions of "TSS:Hg 100166.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=55677 |entrez_id=340485 |gc_percent=0.507463 |gene_alias=ALKCDase2|ASAH3L |gene_description=alkaline ceramidase 2 |gene_name=ACE...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ASAH3L= | ||
| + | |all_trans=ENST00000438342.1:78 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=78 | ||
|distance_to_tss=55677 | |distance_to_tss=55677 | ||
| + | |end=19464606 | ||
|entrez_id=340485 | |entrez_id=340485 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
|gene_alias=ALKCDase2|ASAH3L | |gene_alias=ALKCDase2|ASAH3L | ||
|gene_description=alkaline ceramidase 2 | |gene_description=alkaline ceramidase 2 | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name=microtubule associated protein 1 light chain 3 beta pseudogene 1 | ||
| + | |gene_source=HGNC:49783 | ||
| + | |gene_symbol=MAP1LC3BP1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:49783 | ||
|nearest_ensembl=ENSG00000177076 | |nearest_ensembl=ENSG00000177076 | ||
|nearest_promoter_id=NM_001010887 | |nearest_promoter_id=NM_001010887 | ||
|nearest_refseq=NM_001010887 | |nearest_refseq=NM_001010887 | ||
|nearest_unigene=Hs.41379 | |nearest_unigene=Hs.41379 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=19464601 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000438342.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100166.1 | |tss_id=hg_100166.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:02, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000438342.1 |
|---|---|
| Distance: | 78 |
| Num_trans: | 1 |
| All_trans: | ENST00000438342.1:78 |
TATA-Box annotation
| Distance to TSS: | 55677 |
|---|---|
| Nearest PromoterID: | NM_001010887 |
| Entrez ID: | 340485 |
| Nearest Unigene: | Hs.41379 |
| Nearest Refseq: | NM_001010887 |
| Nearest Ensembl: | ENSG00000177076 |
| Gene Name: | microtubule associated protein 1 light chain 3 beta pseudogene 1 |
| Gene Alias: | ALKCDase2 |
| Gene Description: | alkaline ceramidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
