Difference between revisions of "TSS:Hg 100235.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-27 |entrez_id=554202 |gc_percent=0.741294 |gene_alias=hsa-lnc-31 |gene_description=MIR31 host gene |gene_name=MIR31HG |gene_ty...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_027054:21 AK124391:21 ENST00000304425.3:50 uc003zpe.3:50 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=21 | ||
|distance_to_tss=-27 | |distance_to_tss=-27 | ||
| + | |end=21559732 | ||
|entrez_id=554202 | |entrez_id=554202 | ||
|gc_percent=0.741294 | |gc_percent=0.741294 | ||
|gene_alias=hsa-lnc-31 | |gene_alias=hsa-lnc-31 | ||
|gene_description=MIR31 host gene | |gene_description=MIR31 host gene | ||
| − | |gene_name=MIR31HG | + | |gene_id=554202 |
| + | |gene_name=MIR31 host gene | ||
| + | |gene_source=HGNC:37187 | ||
| + | |gene_symbol=MIR31HG | ||
| + | |gene_synonyms=LOC554202 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:37187 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_027054 | |nearest_promoter_id=NR_027054 | ||
|nearest_refseq=NR_027054 | |nearest_refseq=NR_027054 | ||
|nearest_unigene=Hs.458096 | |nearest_unigene=Hs.458096 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=21559718 | ||
| + | |strand=- | ||
| + | |transcript_name=NR_027054 AK124391 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100235.1 | |tss_id=hg_100235.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:04, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NR_027054 AK124391 |
|---|---|
| Distance: | 21 |
| Num_trans: | 4 |
| All_trans: | NR_027054:21 AK124391:21 ENST00000304425.3:50 uc003zpe.3:50 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NR_027054 |
| Entrez ID: | 554202 |
| Nearest Unigene: | Hs.458096 |
| Nearest Refseq: | NR_027054 |
| Nearest Ensembl: | |
| Gene Name: | MIR31 host gene |
| Gene Alias: | hsa-lnc-31 |
| Gene Description: | MIR31 host gene |
| Gene Type: | ncRNA |
| CpG%: | 0.125 |
| GC%: | 0.741294 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
