Difference between revisions of "TSS:Hg 10030.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=351 |entrez_id=11332 |gc_percent=0.78607 |gene_alias=ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH |gene_description=acyl-CoA thioester...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ACT= | ||
| + | |BACH= | ||
| + | |CTE-II= | ||
| + | |LACH= | ||
| + | |LACH1= | ||
| + | |all_trans=U91316:29 AK300831:29 AK289572:30 ENST00000608083.5:46 ENST00000377860.8:46 ENST00000418124.5:46 uc057btw.1:46 uc057btx.1:46 uc057bty.1:46 D88894:46 AB074415:46 AB074416:46 KJ902229:102 BT006888:104 BC017365:-291 AK057168:-338 ENST00000545482.5:-343 NM_007274:-343 uc001amt.4:-343 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=29 | ||
|distance_to_tss=351 | |distance_to_tss=351 | ||
| + | |end=6393423 | ||
|entrez_id=11332 | |entrez_id=11332 | ||
|gc_percent=0.78607 | |gc_percent=0.78607 | ||
|gene_alias=ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH | |gene_alias=ACH1|ACT|BACH|CTE-II|LACH|LACH1|hBACH | ||
|gene_description=acyl-CoA thioesterase 7 | |gene_description=acyl-CoA thioesterase 7 | ||
| − | |gene_name=ACOT7 | + | |gene_id=11332 |
| + | |gene_name=acyl-CoA thioesterase 7 | ||
| + | |gene_source=HGNC:24157 | ||
| + | |gene_symbol=ACOT7 | ||
| + | |gene_synonyms=ACH1 ACT BACH CTE-II LACH1 MGC1126 hBACH | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hBACH= | ||
| + | |hgnc_mgi_id=HGNC:24157 | ||
|nearest_ensembl=ENSG00000097021 | |nearest_ensembl=ENSG00000097021 | ||
|nearest_promoter_id=NM_007274 | |nearest_promoter_id=NM_007274 | ||
|nearest_refseq=NM_007274 | |nearest_refseq=NM_007274 | ||
|nearest_unigene=Hs.126137 | |nearest_unigene=Hs.126137 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=6393406 | ||
| + | |strand=- | ||
|tata_box="10(CCCTTTATGGCG,+,0.00)" | |tata_box="10(CCCTTTATGGCG,+,0.00)" | ||
| + | |transcript_name=U91316 AK300831 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10030.1 | |tss_id=hg_10030.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DUX0 | ||
}} | }} | ||
Revision as of 17:05, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | U91316 AK300831 |
|---|---|
| Distance: | 29 |
| Num_trans: | 19 |
| All_trans: | U91316:29 AK300831:29 AK289572:30 ENST00000608083.5:46 ENST00000377860.8:46 ENST00000418124.5:46 uc057btw.1:46 uc057btx.1:46 uc057bty.1:46 D88894:46 AB074415:46 AB074416:46 KJ902229:102 BT006888:104 BC017365:-291 AK057168:-338 ENST00000545482.5:-343 NM_007274:-343 uc001amt.4:-343 |
TATA-Box annotation
| Distance to TSS: | 351 |
|---|---|
| Nearest PromoterID: | NM_007274 |
| Entrez ID: | 11332 |
| Nearest Unigene: | Hs.126137 |
| Nearest Refseq: | NM_007274 |
| Nearest Ensembl: | ENSG00000097021 |
| Gene Name: | acyl-CoA thioesterase 7 |
| Gene Alias: | ACH1 |
| Gene Description: | acyl-CoA thioesterase 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.78607 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "10(CCCTTTATGGCG,+,0.00)" |
