Difference between revisions of "TSS:Hg 100305.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-199 |entrez_id=100129669 |gc_percent=0.437811 |gene_alias=C9orf134|bA20A20.1 |gene_description=IZUMO family member 3 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000543880.6:0 uc064sla.1:0 ENST00000418122.1:-48 uc064slb.1:-48 ENST00000604921.5:177 NM_001271706:177 uc031tdg.1:177 | ||
| + | |bA20A20.1= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=-199 | |distance_to_tss=-199 | ||
| + | |end=24545898 | ||
|entrez_id=100129669 | |entrez_id=100129669 | ||
|gc_percent=0.437811 | |gc_percent=0.437811 | ||
|gene_alias=C9orf134|bA20A20.1 | |gene_alias=C9orf134|bA20A20.1 | ||
|gene_description=IZUMO family member 3 | |gene_description=IZUMO family member 3 | ||
| − | |gene_name=IZUMO3 | + | |gene_id=100129669 |
| + | |gene_name=IZUMO family member 3 | ||
| + | |gene_source=HGNC:31421 | ||
| + | |gene_symbol=IZUMO3 | ||
| + | |gene_synonyms=bA20A20.1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31421 | ||
|nearest_ensembl=ENSG00000205442 | |nearest_ensembl=ENSG00000205442 | ||
|nearest_promoter_id=NM_001271706 | |nearest_promoter_id=NM_001271706 | ||
|nearest_refseq=NM_001271706 | |nearest_refseq=NM_001271706 | ||
|nearest_unigene=Hs.573530 | |nearest_unigene=Hs.573530 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=24545852 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000543880.6 uc064sla.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100305.1 | |tss_id=hg_100305.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VZ72 | ||
}} | }} | ||
Revision as of 17:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000543880.6 uc064sla.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | ENST00000543880.6:0 uc064sla.1:0 ENST00000418122.1:-48 uc064slb.1:-48 ENST00000604921.5:177 NM_001271706:177 uc031tdg.1:177 |
TATA-Box annotation
| Distance to TSS: | -199 |
|---|---|
| Nearest PromoterID: | NM_001271706 |
| Entrez ID: | 100129669 |
| Nearest Unigene: | Hs.573530 |
| Nearest Refseq: | NM_001271706 |
| Nearest Ensembl: | ENSG00000205442 |
| Gene Name: | IZUMO family member 3 |
| Gene Alias: | C9orf134 |
| Gene Description: | IZUMO family member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.437811 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
