Difference between revisions of "TSS:Hg 100308.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=437 |entrez_id=286319 |gc_percent=0.736318 |gene_alias=TSG-9|TSG9 |gene_description=tumor suppressor candidate 1 |gene_name=TUSC1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TSG9= | ||
| + | |all_trans=ENST00000358022.4:0 uc003zpx.4:0 AY168647:0 BC110824:0 BC046919:77 BC017510:143 NM_001004125:-392 BC028316:422 BC036931:442 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=437 | |distance_to_tss=437 | ||
| + | |end=25678466 | ||
|entrez_id=286319 | |entrez_id=286319 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=TSG-9|TSG9 | |gene_alias=TSG-9|TSG9 | ||
|gene_description=tumor suppressor candidate 1 | |gene_description=tumor suppressor candidate 1 | ||
| − | |gene_name=TUSC1 | + | |gene_id=286319 |
| + | |gene_name=tumor suppressor candidate 1 | ||
| + | |gene_source=HGNC:31010 | ||
| + | |gene_symbol=TUSC1 | ||
| + | |gene_synonyms=TSG-9 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31010 | ||
|nearest_ensembl=ENSG00000198680 | |nearest_ensembl=ENSG00000198680 | ||
|nearest_promoter_id=NM_001004125 | |nearest_promoter_id=NM_001004125 | ||
|nearest_refseq=NM_001004125 | |nearest_refseq=NM_001004125 | ||
|nearest_unigene=Hs.26268 | |nearest_unigene=Hs.26268 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=25678375 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000358022.4 uc003zpx.4 AY168647 BC110824 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100308.1 | |tss_id=hg_100308.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q2TAM9 | ||
}} | }} | ||
Revision as of 17:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000358022.4 uc003zpx.4 AY168647 BC110824 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000358022.4:0 uc003zpx.4:0 AY168647:0 BC110824:0 BC046919:77 BC017510:143 NM_001004125:-392 BC028316:422 BC036931:442 |
TATA-Box annotation
| Distance to TSS: | 437 |
|---|---|
| Nearest PromoterID: | NM_001004125 |
| Entrez ID: | 286319 |
| Nearest Unigene: | Hs.26268 |
| Nearest Refseq: | NM_001004125 |
| Nearest Ensembl: | ENSG00000198680 |
| Gene Name: | tumor suppressor candidate 1 |
| Gene Alias: | TSG-9 |
| Gene Description: | tumor suppressor candidate 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
