Difference between revisions of "TSS:Hg 100323.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.08 |distance_to_tss=5 |entrez_id=9373 |gc_percent=0.60199 |gene_alias=DOA1|PLA2P|PLAP |gene_description=phospholipase A2 activating protein |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PLA2P= | ||
| + | |PLAP= | ||
| + | |all_trans=ENST00000397292.7:0 NM_001031689:0 uc003zqd.4:0 AL133608:0 AF145020:195 ENST00000520884.5:223 uc003zqe.3:223 AK002143:223 AK001642:283 AK022761:308 BC032551:315 AB385043:408 EU176453:409 EU176795:409 KJ898010:410 ENST00000523212.1:473 uc064slw.1:473 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.08 | |cpg_percent=0.08 | ||
| + | |distance=0 | ||
|distance_to_tss=5 | |distance_to_tss=5 | ||
| + | |end=26947475 | ||
|entrez_id=9373 | |entrez_id=9373 | ||
|gc_percent=0.60199 | |gc_percent=0.60199 | ||
|gene_alias=DOA1|PLA2P|PLAP | |gene_alias=DOA1|PLA2P|PLAP | ||
|gene_description=phospholipase A2 activating protein | |gene_description=phospholipase A2 activating protein | ||
| − | |gene_name=PLAA | + | |gene_id=9373 |
| + | |gene_name=phospholipase A2 activating protein | ||
| + | |gene_source=HGNC:9043 | ||
| + | |gene_symbol=PLAA | ||
| + | |gene_synonyms=DOA1 FLJ11281 FLJ12699 PLA2P PLAP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9043 | ||
|nearest_ensembl=ENSG00000137055 | |nearest_ensembl=ENSG00000137055 | ||
|nearest_promoter_id=NM_001031689 | |nearest_promoter_id=NM_001031689 | ||
|nearest_refseq=NM_004253 | |nearest_refseq=NM_004253 | ||
|nearest_unigene=Hs.27182 | |nearest_unigene=Hs.27182 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=26947455 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000397292.7 NM_001031689 uc003zqd.4 AL133608 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100323.1 | |tss_id=hg_100323.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9Y263 | ||
}} | }} | ||
Revision as of 17:06, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000397292.7 NM_001031689 uc003zqd.4 AL133608 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000397292.7:0 NM_001031689:0 uc003zqd.4:0 AL133608:0 AF145020:195 ENST00000520884.5:223 uc003zqe.3:223 AK002143:223 AK001642:283 AK022761:308 BC032551:315 AB385043:408 EU176453:409 EU176795:409 KJ898010:410 ENST00000523212.1:473 uc064slw.1:473 |
TATA-Box annotation
| Distance to TSS: | 5 |
|---|---|
| Nearest PromoterID: | NM_001031689 |
| Entrez ID: | 9373 |
| Nearest Unigene: | Hs.27182 |
| Nearest Refseq: | NM_004253 |
| Nearest Ensembl: | ENSG00000137055 |
| Gene Name: | phospholipase A2 activating protein |
| Gene Alias: | DOA1 |
| Gene Description: | phospholipase A2 activating protein |
| Gene Type: | protein-coding |
| CpG%: | 0.08 |
| GC%: | 0.60199 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
