Difference between revisions of "TSS:Hg 10038.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=-5387 |entrez_id=8718 |gc_percent=0.701493 |gene_alias=APO-3|DDR3|DR3|LARD|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR |gene_description=TN...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DDR3= | ||
| + | |DR3= | ||
| + | |LARD= | ||
| + | |TNFRSF12= | ||
| + | |TR3= | ||
| + | |TRAMP= | ||
| + | |WSL-1= | ||
| + | |WSL-LR= | ||
| + | |all_trans=ENST00000487949.4:0 uc057bvg.1:0 AK091201:0 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=0 | ||
|distance_to_tss=-5387 | |distance_to_tss=-5387 | ||
| + | |end=6471593 | ||
|entrez_id=8718 | |entrez_id=8718 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
|gene_alias=APO-3|DDR3|DR3|LARD|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR | |gene_alias=APO-3|DDR3|DR3|LARD|TNFRSF12|TR3|TRAMP|WSL-1|WSL-LR | ||
|gene_description=TNF receptor superfamily member 25 | |gene_description=TNF receptor superfamily member 25 | ||
| − | |gene_name= | + | |gene_id=57449 |
| + | |gene_name=pleckstrin homology and RhoGEF domain containing G5 | ||
| + | |gene_source=HGNC:29105 | ||
| + | |gene_symbol=PLEKHG5 | ||
| + | |gene_synonyms=GEF720 KIAA0720 Syx Tech | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29105 | ||
|nearest_ensembl=ENSG00000215788 | |nearest_ensembl=ENSG00000215788 | ||
|nearest_promoter_id=NM_148970 | |nearest_promoter_id=NM_148970 | ||
|nearest_refseq=NM_003790 | |nearest_refseq=NM_003790 | ||
|nearest_unigene=Hs.462529 | |nearest_unigene=Hs.462529 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=6471570 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000487949.4 uc057bvg.1 AK091201 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10038.1 | |tss_id=hg_10038.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KR92 | ||
}} | }} | ||
Revision as of 17:07, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000487949.4 uc057bvg.1 AK091201 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000487949.4:0 uc057bvg.1:0 AK091201:0 |
TATA-Box annotation
| Distance to TSS: | -5387 |
|---|---|
| Nearest PromoterID: | NM_148970 |
| Entrez ID: | 8718 |
| Nearest Unigene: | Hs.462529 |
| Nearest Refseq: | NM_003790 |
| Nearest Ensembl: | ENSG00000215788 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | APO-3 |
| Gene Description: | TNF receptor superfamily member 25 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
