Difference between revisions of "TSS:Hg 100390.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.12 |distance_to_tss=-241 |entrez_id=100129250 |gc_percent=0.706468 |gene_alias=C9orf133 |gene_description=TOPORS antisense RNA 1 |gene_name=TOPORS-A...") |
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| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=U82939:21 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| + | |distance=21 | ||
|distance_to_tss=-241 | |distance_to_tss=-241 | ||
| + | |end=32550964 | ||
|entrez_id=100129250 | |entrez_id=100129250 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
|gene_alias=C9orf133 | |gene_alias=C9orf133 | ||
|gene_description=TOPORS antisense RNA 1 | |gene_description=TOPORS antisense RNA 1 | ||
| − | |gene_name=TOPORS | + | |gene_id=10210 |
| + | |gene_name="topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase" | ||
| + | |gene_source=HGNC:21653 | ||
| + | |gene_symbol=TOPORS | ||
| + | |gene_synonyms=LUN TP53BPL | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:21653 | ||
|nearest_ensembl=ENSG00000235453 | |nearest_ensembl=ENSG00000235453 | ||
|nearest_promoter_id=NR_033991 | |nearest_promoter_id=NR_033991 | ||
|nearest_refseq=NR_033991 | |nearest_refseq=NR_033991 | ||
|nearest_unigene=Hs.664395 | |nearest_unigene=Hs.664395 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=32550841 | ||
| + | |strand=- | ||
| + | |transcript_name=U82939 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100390.1 | |tss_id=hg_100390.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:07, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | U82939 |
|---|---|
| Distance: | 21 |
| Num_trans: | 1 |
| All_trans: | U82939:21 |
TATA-Box annotation
| Distance to TSS: | -241 |
|---|---|
| Nearest PromoterID: | NR_033991 |
| Entrez ID: | 100129250 |
| Nearest Unigene: | Hs.664395 |
| Nearest Refseq: | NR_033991 |
| Nearest Ensembl: | ENSG00000235453 |
| Gene Name: | "topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase" |
| Gene Alias: | C9orf133 |
| Gene Description: | TOPORS antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.12 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
