Difference between revisions of "TSS:Hg 100411.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=21379 |entrez_id=3301 |gc_percent=0.402985 |gene_alias=DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2 |gene_description=DnaJ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DjA1= | ||
| + | |HDJ2= | ||
| + | |HSDJ= | ||
| + | |HSJ-2= | ||
| + | |HSJ2= | ||
| + | |HSPF4= | ||
| + | |NEDD7= | ||
| + | |all_trans=AK001732:-427 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-427 | ||
|distance_to_tss=21379 | |distance_to_tss=21379 | ||
| + | |end=33046584 | ||
|entrez_id=3301 | |entrez_id=3301 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2 | |gene_alias=DJ-2|DjA1|HDJ2|HSDJ|HSJ-2|HSJ2|HSPF4|NEDD7|hDJ-2 | ||
|gene_description=DnaJ heat shock protein family (Hsp40) member A1 | |gene_description=DnaJ heat shock protein family (Hsp40) member A1 | ||
| − | |gene_name= | + | |gene_id=55234 |
| + | |gene_name=smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) | ||
| + | |gene_source=HGNC:18247 | ||
| + | |gene_symbol=SMU1 | ||
| + | |gene_synonyms=BWD FLJ10805 SMU-1 fSAP57 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hDJ-2= | ||
| + | |hgnc_mgi_id=HGNC:18247 | ||
|nearest_ensembl=ENSG00000086061 | |nearest_ensembl=ENSG00000086061 | ||
|nearest_promoter_id=NM_001539 | |nearest_promoter_id=NM_001539 | ||
|nearest_refseq=NM_001539 | |nearest_refseq=NM_001539 | ||
|nearest_unigene=Hs.445203 | |nearest_unigene=Hs.445203 | ||
| + | |num_trans=1 | ||
| + | |species=human | ||
| + | |start=33046580 | ||
| + | |strand=- | ||
| + | |transcript_name=AK001732 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100411.1 | |tss_id=hg_100411.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK001732 |
|---|---|
| Distance: | -427 |
| Num_trans: | 1 |
| All_trans: | AK001732:-427 |
TATA-Box annotation
| Distance to TSS: | 21379 |
|---|---|
| Nearest PromoterID: | NM_001539 |
| Entrez ID: | 3301 |
| Nearest Unigene: | Hs.445203 |
| Nearest Refseq: | NM_001539 |
| Nearest Ensembl: | ENSG00000086061 |
| Gene Name: | smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans) |
| Gene Alias: | DJ-2 |
| Gene Description: | DnaJ heat shock protein family (Hsp40) member A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
