Difference between revisions of "TSS:Hg 10043.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=32 |entrez_id=57449 |gc_percent=0.671642 |gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech |gene_description=pleckstrin homology and Rho...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DSMA4= | ||
| + | |GEF720= | ||
| + | |Syx= | ||
| + | |Tech= | ||
| + | |all_trans=ENST00000400913.5:-26 NM_001042665:-26 uc001ank.1:-26 AB097001:-26 ENST00000535355.5:448 NM_001265593:448 uc010nzr.1:448 AK299523:448 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=-26 | ||
|distance_to_tss=32 | |distance_to_tss=32 | ||
| + | |end=6485928 | ||
|entrez_id=57449 | |entrez_id=57449 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
|gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech | |gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech | ||
|gene_description=pleckstrin homology and RhoGEF domain containing G5 | |gene_description=pleckstrin homology and RhoGEF domain containing G5 | ||
| − | |gene_name=PLEKHG5 | + | |gene_id=57449 |
| + | |gene_name=pleckstrin homology and RhoGEF domain containing G5 | ||
| + | |gene_source=HGNC:29105 | ||
| + | |gene_symbol=PLEKHG5 | ||
| + | |gene_synonyms=GEF720 KIAA0720 Syx Tech | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29105 | ||
|nearest_ensembl=ENSG00000171680 | |nearest_ensembl=ENSG00000171680 | ||
|nearest_promoter_id=NM_001042665 | |nearest_promoter_id=NM_001042665 | ||
|nearest_refseq=NM_020631 | |nearest_refseq=NM_020631 | ||
|nearest_unigene=Hs.284232 | |nearest_unigene=Hs.284232 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=6485916 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000400913.5 NM_001042665 uc001ank.1 AB097001 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10043.1 | |tss_id=hg_10043.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O94827 | ||
}} | }} | ||
Revision as of 17:08, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000400913.5 NM_001042665 uc001ank.1 AB097001 |
|---|---|
| Distance: | -26 |
| Num_trans: | 8 |
| All_trans: | ENST00000400913.5:-26 NM_001042665:-26 uc001ank.1:-26 AB097001:-26 ENST00000535355.5:448 NM_001265593:448 uc010nzr.1:448 AK299523:448 |
TATA-Box annotation
| Distance to TSS: | 32 |
|---|---|
| Nearest PromoterID: | NM_001042665 |
| Entrez ID: | 57449 |
| Nearest Unigene: | Hs.284232 |
| Nearest Refseq: | NM_020631 |
| Nearest Ensembl: | ENSG00000171680 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | CMTRIC |
| Gene Description: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
