Difference between revisions of "TSS:Hg 100457.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=221 |entrez_id=364 |gc_percent=0.616915 |gene_alias=AQP7L|AQPap|GLYCQTL |gene_description=aquaporin 7 |gene_name=AQP7 |gene_type...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AQPap= | ||
| + | |GLYCQTL= | ||
| + | |all_trans=ENST00000624420.3:0 uc064spj.1:0 AK294028:0 ENST00000624890.3:-23 uc064spg.1:-23 AK297885:-23 ENST00000377425.8:-35 uc003zsu.2:-35 BC062701:-35 ENST00000537089.5:-41 uc064spc.1:-41 BC119672:-41 BC119673:-41 ENST00000297988.5:-46 uc003zst.3:-46 AB006190:-46 ENST00000623097.3:-81 uc064spd.1:-81 ENST00000624075.3:-113 uc011lnx.2:-113 AK297860:-113 ENST00000625032.1:-172 uc064spo.1:-172 AK301949:-172 ENST00000623519.1:-179 uc064spp.1:-179 ENST00000625109.3:-207 uc064spl.1:-207 ENST00000624005.3:-209 NM_001170:-209 NM_001318156:-209 NM_001318157:-209 NM_001318158:-209 NR_134513:-209 NR_134514:-209 NR_134515:-209 uc064sph.1:-209 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| + | |distance=0 | ||
|distance_to_tss=221 | |distance_to_tss=221 | ||
| + | |end=33402473 | ||
|entrez_id=364 | |entrez_id=364 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=AQP7L|AQPap|GLYCQTL | |gene_alias=AQP7L|AQPap|GLYCQTL | ||
|gene_description=aquaporin 7 | |gene_description=aquaporin 7 | ||
| − | |gene_name=AQP7 | + | |gene_id=364 |
| + | |gene_name=aquaporin 7 | ||
| + | |gene_source=HGNC:640 | ||
| + | |gene_symbol=AQP7 | ||
| + | |gene_synonyms=AQP9 AQPap | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:640 | ||
|nearest_ensembl=ENSG00000165269 | |nearest_ensembl=ENSG00000165269 | ||
|nearest_promoter_id=NM_001318157 | |nearest_promoter_id=NM_001318157 | ||
|nearest_refseq=NM_001170 | |nearest_refseq=NM_001170 | ||
|nearest_unigene=Hs.455323 | |nearest_unigene=Hs.455323 | ||
| + | |num_trans=37 | ||
| + | |species=human | ||
| + | |start=33402449 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000624420.3 uc064spj.1 AK294028 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100457.1 | |tss_id=hg_100457.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A096LP23 B7Z1W7 | ||
}} | }} | ||
Revision as of 17:09, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000624420.3 uc064spj.1 AK294028 |
|---|---|
| Distance: | 0 |
| Num_trans: | 37 |
| All_trans: | ENST00000624420.3:0 uc064spj.1:0 AK294028:0 ENST00000624890.3:-23 uc064spg.1:-23 AK297885:-23 ENST00000377425.8:-35 uc003zsu.2:-35 BC062701:-35 ENST00000537089.5:-41 uc064spc.1:-41 BC119672:-41 BC119673:-41 ENST00000297988.5:-46 uc003zst.3:-46 AB006190:-46 ENST00000623097.3:-81 uc064spd.1:-81 ENST00000624075.3:-113 uc011lnx.2:-113 AK297860:-113 ENST00000625032.1:-172 uc064spo.1:-172 AK301949:-172 ENST00000623519.1:-179 uc064spp.1:-179 ENST00000625109.3:-207 uc064spl.1:-207 ENST00000624005.3:-209 NM_001170:-209 NM_001318156:-209 NM_001318157:-209 NM_001318158:-209 NR_134513:-209 NR_134514:-209 NR_134515:-209 uc064sph.1:-209 |
TATA-Box annotation
| Distance to TSS: | 221 |
|---|---|
| Nearest PromoterID: | NM_001318157 |
| Entrez ID: | 364 |
| Nearest Unigene: | Hs.455323 |
| Nearest Refseq: | NM_001170 |
| Nearest Ensembl: | ENSG00000165269 |
| Gene Name: | aquaporin 7 |
| Gene Alias: | AQP7L |
| Gene Description: | aquaporin 7 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
