Difference between revisions of "TSS:Hg 100472.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=-148 |entrez_id=360 |gc_percent=0.686567 |gene_alias=AQP-3|GIL |gene_description=aquaporin 3 (Gill blood group) |gene_name=AQP3...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |GIL= | ||
| + | |all_trans=NM_004925:136 NM_001318144:136 ENST00000297991.4:158 uc003zsx.4:158 ENST00000493581.1:173 uc064spr.1:173 AK095363:173 AK292208:176 AK315760:176 AK303206:176 ENST00000463983.5:187 uc064spt.1:187 AB001325:196 BC013566:202 AJ493597:216 KJ890695:238 CR541991:239 BT007199:239 CR542025:239 ENST00000473153.1:260 uc064spu.1:260 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=136 | ||
|distance_to_tss=-148 | |distance_to_tss=-148 | ||
| + | |end=33447793 | ||
|entrez_id=360 | |entrez_id=360 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=AQP-3|GIL | |gene_alias=AQP-3|GIL | ||
|gene_description=aquaporin 3 (Gill blood group) | |gene_description=aquaporin 3 (Gill blood group) | ||
| − | |gene_name=AQP3 | + | |gene_id=360 |
| + | |gene_name=aquaporin 3 (Gill blood group) | ||
| + | |gene_source=HGNC:636 | ||
| + | |gene_symbol=AQP3 | ||
| + | |gene_synonyms=GIL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:636 | ||
|nearest_ensembl=ENSG00000165272 | |nearest_ensembl=ENSG00000165272 | ||
|nearest_promoter_id=NM_001318144 | |nearest_promoter_id=NM_001318144 | ||
|nearest_refseq=NM_004925 | |nearest_refseq=NM_004925 | ||
|nearest_unigene=Hs.234642 | |nearest_unigene=Hs.234642 | ||
| + | |num_trans=21 | ||
| + | |species=human | ||
| + | |start=33447768 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_004925 NM_001318144 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100472.1 | |tss_id=hg_100472.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q92482 | ||
}} | }} | ||
Revision as of 17:09, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_004925 NM_001318144 |
|---|---|
| Distance: | 136 |
| Num_trans: | 21 |
| All_trans: | NM_004925:136 NM_001318144:136 ENST00000297991.4:158 uc003zsx.4:158 ENST00000493581.1:173 uc064spr.1:173 AK095363:173 AK292208:176 AK315760:176 AK303206:176 ENST00000463983.5:187 uc064spt.1:187 AB001325:196 BC013566:202 AJ493597:216 KJ890695:238 CR541991:239 BT007199:239 CR542025:239 ENST00000473153.1:260 uc064spu.1:260 |
TATA-Box annotation
| Distance to TSS: | -148 |
|---|---|
| Nearest PromoterID: | NM_001318144 |
| Entrez ID: | 360 |
| Nearest Unigene: | Hs.234642 |
| Nearest Refseq: | NM_004925 |
| Nearest Ensembl: | ENSG00000165272 |
| Gene Name: | aquaporin 3 (Gill blood group) |
| Gene Alias: | AQP-3 |
| Gene Description: | aquaporin 3 (Gill blood group) |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
