Difference between revisions of "TSS:Hg 100485.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=1344 |entrez_id=54926 |gc_percent=0.447761 |gene_alias=CDC34B|E2-CDC34B|UBC3B |gene_description=ubiquitin conjugating enzyme E2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |E2-CDC34B= | ||
| + | |UBC3B= | ||
| + | |all_trans=ENST00000454429.2:-266 uc064sqs.1:-266 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| + | |distance=-266 | ||
|distance_to_tss=1344 | |distance_to_tss=1344 | ||
| + | |end=33818529 | ||
|entrez_id=54926 | |entrez_id=54926 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
|gene_alias=CDC34B|E2-CDC34B|UBC3B | |gene_alias=CDC34B|E2-CDC34B|UBC3B | ||
|gene_description=ubiquitin conjugating enzyme E2 R2 | |gene_description=ubiquitin conjugating enzyme E2 R2 | ||
| − | |gene_name=UBE2R2 | + | |gene_id= |
| + | |gene_name=UBE2R2 antisense RNA 1 | ||
| + | |gene_source=HGNC:49911 | ||
| + | |gene_symbol=UBE2R2-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:49911 | ||
|nearest_ensembl=ENSG00000107341 | |nearest_ensembl=ENSG00000107341 | ||
|nearest_promoter_id=NM_017811 | |nearest_promoter_id=NM_017811 | ||
|nearest_refseq=NM_017811 | |nearest_refseq=NM_017811 | ||
|nearest_unigene=Hs.643648 | |nearest_unigene=Hs.643648 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=33818526 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000454429.2 uc064sqs.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100485.1 | |tss_id=hg_100485.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:10, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000454429.2 uc064sqs.1 |
|---|---|
| Distance: | -266 |
| Num_trans: | 2 |
| All_trans: | ENST00000454429.2:-266 uc064sqs.1:-266 |
TATA-Box annotation
| Distance to TSS: | 1344 |
|---|---|
| Nearest PromoterID: | NM_017811 |
| Entrez ID: | 54926 |
| Nearest Unigene: | Hs.643648 |
| Nearest Refseq: | NM_017811 |
| Nearest Ensembl: | ENSG00000107341 |
| Gene Name: | UBE2R2 antisense RNA 1 |
| Gene Alias: | CDC34B |
| Gene Description: | ubiquitin conjugating enzyme E2 R2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
