Difference between revisions of "TSS:Hg 100534.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=2891 |entrez_id=10280 |gc_percent=0.527363 |gene_alias=ALS16|DSMA2|OPRS1|SIG-1R|SR-BP|SR-BP1|SRBP|hSigmaR1|sigma1R |gene_descrip...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |DSMA2= | ||
| + | |OPRS1= | ||
| + | |SIG-1R= | ||
| + | |SR-BP= | ||
| + | |SR-BP1= | ||
| + | |SRBP= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance= | ||
|distance_to_tss=2891 | |distance_to_tss=2891 | ||
| + | |end=34634955 | ||
|entrez_id=10280 | |entrez_id=10280 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| Line 8: | Line 17: | ||
|gene_name=SIGMAR1 | |gene_name=SIGMAR1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hSigmaR1= | ||
|nearest_ensembl=ENSG00000147955 | |nearest_ensembl=ENSG00000147955 | ||
|nearest_promoter_id=NM_001282207 | |nearest_promoter_id=NM_001282207 | ||
|nearest_refseq=NM_005866 | |nearest_refseq=NM_005866 | ||
|nearest_unigene=Hs.522087 | |nearest_unigene=Hs.522087 | ||
| + | |num_trans=0 | ||
| + | |sigma1R= | ||
| + | |species=human | ||
| + | |start=34634914 | ||
| + | |strand=- | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100534.1 | |tss_id=hg_100534.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 2891 |
|---|---|
| Nearest PromoterID: | NM_001282207 |
| Entrez ID: | 10280 |
| Nearest Unigene: | Hs.522087 |
| Nearest Refseq: | NM_005866 |
| Nearest Ensembl: | ENSG00000147955 |
| Gene Name: | SIGMAR1 |
| Gene Alias: | ALS16 |
| Gene Description: | sigma non-opioid intracellular receptor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
