Difference between revisions of "TSS:Hg 100573.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=-179 |entrez_id=80256 |gc_percent=0.81592 |gene_alias=KIAA1539 |gene_description=family with sequence similarity 214 member B |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000378561.5:-10 uc003zwm.4:-10 AB040972:-10 ENST00000603301.5:-24 uc003zwl.4:-24 ENST00000378557.1:120 uc064swk.1:120 NM_001317991:169 AL583909:169 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=-10 | ||
|distance_to_tss=-179 | |distance_to_tss=-179 | ||
| + | |end=35111564 | ||
|entrez_id=80256 | |entrez_id=80256 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
|gene_alias=KIAA1539 | |gene_alias=KIAA1539 | ||
|gene_description=family with sequence similarity 214 member B | |gene_description=family with sequence similarity 214 member B | ||
| − | |gene_name=FAM214B | + | |gene_id=80256 |
| + | |gene_name=family with sequence similarity 214 member B | ||
| + | |gene_source=HGNC:25666 | ||
| + | |gene_symbol=FAM214B | ||
| + | |gene_synonyms=FLJ11560 bA182N22.6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25666 | ||
|nearest_ensembl=ENSG00000005238 | |nearest_ensembl=ENSG00000005238 | ||
|nearest_promoter_id=NM_001317991 | |nearest_promoter_id=NM_001317991 | ||
|nearest_refseq=NM_025182 | |nearest_refseq=NM_025182 | ||
|nearest_unigene=Hs.301696 | |nearest_unigene=Hs.301696 | ||
| + | |num_trans=9 | ||
| + | |species=human | ||
| + | |start=35111542 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000378561.5 uc003zwm.4 AB040972 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100573.1 | |tss_id=hg_100573.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7L5A3 | ||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000378561.5 uc003zwm.4 AB040972 |
|---|---|
| Distance: | -10 |
| Num_trans: | 9 |
| All_trans: | ENST00000378561.5:-10 uc003zwm.4:-10 AB040972:-10 ENST00000603301.5:-24 uc003zwl.4:-24 ENST00000378557.1:120 uc064swk.1:120 NM_001317991:169 AL583909:169 |
TATA-Box annotation
| Distance to TSS: | -179 |
|---|---|
| Nearest PromoterID: | NM_001317991 |
| Entrez ID: | 80256 |
| Nearest Unigene: | Hs.301696 |
| Nearest Refseq: | NM_025182 |
| Nearest Ensembl: | ENSG00000005238 |
| Gene Name: | family with sequence similarity 214 member B |
| Gene Alias: | KIAA1539 |
| Gene Description: | family with sequence similarity 214 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
