Difference between revisions of "TSS:Hg 100583.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=45 |entrez_id=730112 |gc_percent=0.59204 |gene_alias=- |gene_description=family with sequence similarity 166 member B |gene_nam...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000492890.5:-18 uc064swu.1:-18 KJ896345:22 ENST00000619051.4:-43 ENST00000399742.6:-43 ENST00000447837.1:-43 NM_001164310:-43 NM_001287239:-43 NM_001287238:-43 NM_001099951:-43 uc064swv.1:-43 uc010mkr.4:-43 uc003zwy.4:-43 BC146928:-43 BC146933:-43 BC171840:-43 BC171851:-43 BC129999:-43 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-18 | ||
|distance_to_tss=45 | |distance_to_tss=45 | ||
| + | |end=35563856 | ||
|entrez_id=730112 | |entrez_id=730112 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=family with sequence similarity 166 member B | |gene_description=family with sequence similarity 166 member B | ||
| − | |gene_name=FAM166B | + | |gene_id=730112 |
| + | |gene_name=family with sequence similarity 166 member B | ||
| + | |gene_source=HGNC:34242 | ||
| + | |gene_symbol=FAM166B | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:34242 | ||
|nearest_ensembl=ENSG00000215187 | |nearest_ensembl=ENSG00000215187 | ||
|nearest_promoter_id=NM_001099951 | |nearest_promoter_id=NM_001099951 | ||
|nearest_refseq=NM_001099951 | |nearest_refseq=NM_001099951 | ||
|nearest_unigene=Hs.98959 | |nearest_unigene=Hs.98959 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=35563851 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000492890.5 uc064swu.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100583.1 | |tss_id=hg_100583.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000492890.5 uc064swu.1 |
|---|---|
| Distance: | -18 |
| Num_trans: | 18 |
| All_trans: | ENST00000492890.5:-18 uc064swu.1:-18 KJ896345:22 ENST00000619051.4:-43 ENST00000399742.6:-43 ENST00000447837.1:-43 NM_001164310:-43 NM_001287239:-43 NM_001287238:-43 NM_001099951:-43 uc064swv.1:-43 uc010mkr.4:-43 uc003zwy.4:-43 BC146928:-43 BC146933:-43 BC171840:-43 BC171851:-43 BC129999:-43 |
TATA-Box annotation
| Distance to TSS: | 45 |
|---|---|
| Nearest PromoterID: | NM_001099951 |
| Entrez ID: | 730112 |
| Nearest Unigene: | Hs.98959 |
| Nearest Refseq: | NM_001099951 |
| Nearest Ensembl: | ENSG00000215187 |
| Gene Name: | family with sequence similarity 166 member B |
| Gene Alias: | - |
| Gene Description: | family with sequence similarity 166 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
