Difference between revisions of "TSS:Hg 10060.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.145 |distance_to_tss=30 |entrez_id=9903 |gc_percent=0.731343 |gene_alias=- |gene_description=kelch like family member 21 |gene_name=KLHL21 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000377658.8:0 uc001aoa.3:0 AK075305:0 BC034039:0 BC064980:9 BC091648:9 NM_014851:-22 ENST00000377663.3:-125 uc001anz.2:-125 AB007938:-125 AK090472:193 DQ586011:308 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| + | |distance=0 | ||
|distance_to_tss=30 | |distance_to_tss=30 | ||
| + | |end=6602876 | ||
|entrez_id=9903 | |entrez_id=9903 | ||
|gc_percent=0.731343 | |gc_percent=0.731343 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=kelch like family member 21 | |gene_description=kelch like family member 21 | ||
| − | |gene_name=KLHL21 | + | |gene_id=9903 |
| + | |gene_name=kelch like family member 21 | ||
| + | |gene_source=HGNC:29041 | ||
| + | |gene_symbol=KLHL21 | ||
| + | |gene_synonyms=KIAA0469 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29041 | ||
|nearest_ensembl=ENSG00000162413 | |nearest_ensembl=ENSG00000162413 | ||
|nearest_promoter_id=NM_001324309 | |nearest_promoter_id=NM_001324309 | ||
|nearest_refseq=NM_014851 | |nearest_refseq=NM_014851 | ||
|nearest_unigene=Hs.7764 | |nearest_unigene=Hs.7764 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=6602859 | ||
| + | |strand=- | ||
|tata_box="-32(CTATTTATAGCA,+,0.00)" | |tata_box="-32(CTATTTATAGCA,+,0.00)" | ||
| + | |transcript_name=ENST00000377658.8 uc001aoa.3 AK075305 BC034039 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10060.1 | |tss_id=hg_10060.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9UJP4 | ||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377658.8 uc001aoa.3 AK075305 BC034039 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000377658.8:0 uc001aoa.3:0 AK075305:0 BC034039:0 BC064980:9 BC091648:9 NM_014851:-22 ENST00000377663.3:-125 uc001anz.2:-125 AB007938:-125 AK090472:193 DQ586011:308 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NM_001324309 |
| Entrez ID: | 9903 |
| Nearest Unigene: | Hs.7764 |
| Nearest Refseq: | NM_014851 |
| Nearest Ensembl: | ENSG00000162413 |
| Gene Name: | kelch like family member 21 |
| Gene Alias: | - |
| Gene Description: | kelch like family member 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.731343 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(CTATTTATAGCA,+,0.00)" |
