Difference between revisions of "TSS:Hg 10062.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=-795 |entrez_id=9903 |gc_percent=0.616915 |gene_alias=- |gene_description=kelch like family member 21 |gene_name=KLHL21 |gene_ty...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000610898.1:1 uc057bvx.1:1 BC111766:1 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=1 | ||
|distance_to_tss=-795 | |distance_to_tss=-795 | ||
| + | |end=6603702 | ||
|entrez_id=9903 | |entrez_id=9903 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=kelch like family member 21 | |gene_description=kelch like family member 21 | ||
| − | |gene_name=KLHL21 | + | |gene_id=9903 |
| + | |gene_name=kelch like family member 21 | ||
| + | |gene_source=HGNC:29041 | ||
| + | |gene_symbol=KLHL21 | ||
| + | |gene_synonyms=KIAA0469 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29041 | ||
|nearest_ensembl=ENSG00000162413 | |nearest_ensembl=ENSG00000162413 | ||
|nearest_promoter_id=NM_014851 | |nearest_promoter_id=NM_014851 | ||
|nearest_refseq=NM_014851 | |nearest_refseq=NM_014851 | ||
|nearest_unigene=Hs.7764 | |nearest_unigene=Hs.7764 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=6603684 | ||
| + | |strand=- | ||
|tata_box="-10(CTCTTTATACCC,+,0.00)" | |tata_box="-10(CTCTTTATACCC,+,0.00)" | ||
| + | |transcript_name=ENST00000610898.1 uc057bvx.1 BC111766 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10062.1 | |tss_id=hg_10062.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q2NKK7 | ||
}} | }} | ||
Revision as of 17:13, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000610898.1 uc057bvx.1 BC111766 |
|---|---|
| Distance: | 1 |
| Num_trans: | 3 |
| All_trans: | ENST00000610898.1:1 uc057bvx.1:1 BC111766:1 |
TATA-Box annotation
| Distance to TSS: | -795 |
|---|---|
| Nearest PromoterID: | NM_014851 |
| Entrez ID: | 9903 |
| Nearest Unigene: | Hs.7764 |
| Nearest Refseq: | NM_014851 |
| Nearest Ensembl: | ENSG00000162413 |
| Gene Name: | kelch like family member 21 |
| Gene Alias: | - |
| Gene Description: | kelch like family member 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-10(CTCTTTATACCC,+,0.00)" |
