Difference between revisions of "TSS:Hg 100646.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-108 |entrez_id=10488 |gc_percent=0.756219 |gene_alias=LUMAN|LZIP|sLZIP |gene_description=cAMP responsive element binding prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LZIP= | ||
| + | |all_trans=BC042923:26 AF078828:58 AF177198:76 ENST00000378192.2:103 uc064syo.1:103 BC020881:103 BC021005:-144 AB028950:-153 ENST00000314888.9:-178 NM_006289:-178 uc003zxt.3:-178 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=26 | ||
|distance_to_tss=-108 | |distance_to_tss=-108 | ||
| + | |end=35732217 | ||
|entrez_id=10488 | |entrez_id=10488 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=LUMAN|LZIP|sLZIP | |gene_alias=LUMAN|LZIP|sLZIP | ||
|gene_description=cAMP responsive element binding protein 3 | |gene_description=cAMP responsive element binding protein 3 | ||
| − | |gene_name= | + | |gene_id=7094 |
| + | |gene_name=talin 1 | ||
| + | |gene_source=HGNC:11845 | ||
| + | |gene_symbol=TLN1 | ||
| + | |gene_synonyms=ILWEQ | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11845 | ||
|nearest_ensembl=ENSG00000107175 | |nearest_ensembl=ENSG00000107175 | ||
|nearest_promoter_id=NM_006368 | |nearest_promoter_id=NM_006368 | ||
|nearest_refseq=NM_006368 | |nearest_refseq=NM_006368 | ||
|nearest_unigene=Hs.522110 | |nearest_unigene=Hs.522110 | ||
| + | |num_trans=11 | ||
| + | |sLZIP= | ||
| + | |species=human | ||
| + | |start=35732206 | ||
| + | |strand=- | ||
| + | |transcript_name=BC042923 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100646.1 | |tss_id=hg_100646.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:13, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC042923 |
|---|---|
| Distance: | 26 |
| Num_trans: | 11 |
| All_trans: | BC042923:26 AF078828:58 AF177198:76 ENST00000378192.2:103 uc064syo.1:103 BC020881:103 BC021005:-144 AB028950:-153 ENST00000314888.9:-178 NM_006289:-178 uc003zxt.3:-178 |
TATA-Box annotation
| Distance to TSS: | -108 |
|---|---|
| Nearest PromoterID: | NM_006368 |
| Entrez ID: | 10488 |
| Nearest Unigene: | Hs.522110 |
| Nearest Refseq: | NM_006368 |
| Nearest Ensembl: | ENSG00000107175 |
| Gene Name: | talin 1 |
| Gene Alias: | LUMAN |
| Gene Description: | cAMP responsive element binding protein 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
