Difference between revisions of "TSS:Hg 100662.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=-2441 |entrez_id=692094 |gc_percent=0.651741 |gene_alias=PSMP |gene_description="microseminoprotein, prostate associated" |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000414286.1:81 uc064syv.1:81 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=81 | ||
|distance_to_tss=-2441 | |distance_to_tss=-2441 | ||
| + | |end=35756742 | ||
|entrez_id=692094 | |entrez_id=692094 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
|gene_alias=PSMP | |gene_alias=PSMP | ||
|gene_description="microseminoprotein, prostate associated" | |gene_description="microseminoprotein, prostate associated" | ||
| − | |gene_name=MSMP | + | |gene_id=692094 |
| + | |gene_name="microseminoprotein, prostate associated" | ||
| + | |gene_source=HGNC:29663 | ||
| + | |gene_symbol=MSMP | ||
| + | |gene_synonyms=PC-3 PSMP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:29663 | ||
|nearest_ensembl=ENSG00000215183 | |nearest_ensembl=ENSG00000215183 | ||
|nearest_promoter_id=NM_001044264 | |nearest_promoter_id=NM_001044264 | ||
|nearest_refseq=NM_001044264 | |nearest_refseq=NM_001044264 | ||
|nearest_unigene=Hs.571601 | |nearest_unigene=Hs.571601 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=35756693 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000414286.1 uc064syv.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100662.1 | |tss_id=hg_100662.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000414286.1 uc064syv.1 |
|---|---|
| Distance: | 81 |
| Num_trans: | 2 |
| All_trans: | ENST00000414286.1:81 uc064syv.1:81 |
TATA-Box annotation
| Distance to TSS: | -2441 |
|---|---|
| Nearest PromoterID: | NM_001044264 |
| Entrez ID: | 692094 |
| Nearest Unigene: | Hs.571601 |
| Nearest Refseq: | NM_001044264 |
| Nearest Ensembl: | ENSG00000215183 |
| Gene Name: | "microseminoprotein, prostate associated" |
| Gene Alias: | PSMP |
| Gene Description: | "microseminoprotein, prostate associated" |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
