Difference between revisions of "TSS:Hg 100667.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=20 |entrez_id=84681 |gc_percent=0.746269 |gene_alias=HIT-17 |gene_description=histidine triad nucleotide binding protein 2 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000259667.5:0 ENST00000461169.1:0 uc003zyh.4:0 uc064szu.1:0 AF356875:0 BC047737:0 AF085236:0 AY033094:1 AF356515:8 NM_032593:-12 AK222582:15 ENST00000472085.5:25 uc064szq.1:25 ENST00000474908.5:-319 uc064szr.1:-319 BC033538:-319 ENST00000474848.6:-321 uc064szs.1:-321 AK309795:-451 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=0 | ||
|distance_to_tss=20 | |distance_to_tss=20 | ||
| + | |end=35815033 | ||
|entrez_id=84681 | |entrez_id=84681 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=HIT-17 | |gene_alias=HIT-17 | ||
|gene_description=histidine triad nucleotide binding protein 2 | |gene_description=histidine triad nucleotide binding protein 2 | ||
| − | |gene_name=HINT2 | + | |gene_id=84681 |
| + | |gene_name=histidine triad nucleotide binding protein 2 | ||
| + | |gene_source=HGNC:18344 | ||
| + | |gene_symbol=HINT2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18344 | ||
|nearest_ensembl=ENSG00000137133 | |nearest_ensembl=ENSG00000137133 | ||
|nearest_promoter_id=NM_032593 | |nearest_promoter_id=NM_032593 | ||
|nearest_refseq=NM_032593 | |nearest_refseq=NM_032593 | ||
|nearest_unigene=Hs.70573 | |nearest_unigene=Hs.70573 | ||
| + | |num_trans=19 | ||
| + | |species=human | ||
| + | |start=35815016 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000259667.5 ENST00000461169.1 uc003zyh.4 uc064szu.1 AF356875 BC047737 AF085236 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100667.1 | |tss_id=hg_100667.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q8WYJ5 Q9BX68 | ||
}} | }} | ||
Revision as of 17:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000259667.5 ENST00000461169.1 uc003zyh.4 uc064szu.1 AF356875 BC047737 AF085236 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000259667.5:0 ENST00000461169.1:0 uc003zyh.4:0 uc064szu.1:0 AF356875:0 BC047737:0 AF085236:0 AY033094:1 AF356515:8 NM_032593:-12 AK222582:15 ENST00000472085.5:25 uc064szq.1:25 ENST00000474908.5:-319 uc064szr.1:-319 BC033538:-319 ENST00000474848.6:-321 uc064szs.1:-321 AK309795:-451 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_032593 |
| Entrez ID: | 84681 |
| Nearest Unigene: | Hs.70573 |
| Nearest Refseq: | NM_032593 |
| Nearest Ensembl: | ENSG00000137133 |
| Gene Name: | histidine triad nucleotide binding protein 2 |
| Gene Alias: | HIT-17 |
| Gene Description: | histidine triad nucleotide binding protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
