Difference between revisions of "TSS:Hg 100741.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.105 |distance_to_tss=91 |entrez_id=401505 |gc_percent=0.641791 |gene_alias=C9orf105|Tom5|bA613M10.3 |gene_description=translocase of outer mitochond...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Tom5= | ||
| + | |all_trans=AB435233:4 KJ896253:6 BC034247:-10 ENST00000544379.1:-35 uc011lql.3:-35 ENST00000377773.9:-36 uc004aaf.4:-36 BC029423:-36 ENST00000401811.3:-43 uc064tcz.1:-43 ENST00000537239.2:67 ENST00000540941.1:67 uc064tcv.1:67 uc064tcx.1:67 CR627326:67 NM_001001790:-78 NM_001134485:-78 NM_001134484:-78 ENST00000321301.6:-81 uc010mlx.4:-81 | ||
| + | |bA613M10.3= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| + | |distance=4 | ||
|distance_to_tss=91 | |distance_to_tss=91 | ||
| + | |end=37592561 | ||
|entrez_id=401505 | |entrez_id=401505 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=C9orf105|Tom5|bA613M10.3 | |gene_alias=C9orf105|Tom5|bA613M10.3 | ||
|gene_description=translocase of outer mitochondrial membrane 5 | |gene_description=translocase of outer mitochondrial membrane 5 | ||
| − | |gene_name=TOMM5 | + | |gene_id=401505 |
| + | |gene_name=translocase of outer mitochondrial membrane 5 | ||
| + | |gene_source=HGNC:31369 | ||
| + | |gene_symbol=TOMM5 | ||
| + | |gene_synonyms=Tom5 bA613M10.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31369 | ||
|nearest_ensembl=ENSG00000175768 | |nearest_ensembl=ENSG00000175768 | ||
|nearest_promoter_id=NM_001134485 | |nearest_promoter_id=NM_001134485 | ||
|nearest_refseq=NM_001001790 | |nearest_refseq=NM_001001790 | ||
|nearest_unigene=Hs.130774 | |nearest_unigene=Hs.130774 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=37592535 | ||
| + | |strand=- | ||
| + | |transcript_name=AB435233 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100741.1 | |tss_id=hg_100741.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:13, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB435233 |
|---|---|
| Distance: | 4 |
| Num_trans: | 20 |
| All_trans: | AB435233:4 KJ896253:6 BC034247:-10 ENST00000544379.1:-35 uc011lql.3:-35 ENST00000377773.9:-36 uc004aaf.4:-36 BC029423:-36 ENST00000401811.3:-43 uc064tcz.1:-43 ENST00000537239.2:67 ENST00000540941.1:67 uc064tcv.1:67 uc064tcx.1:67 CR627326:67 NM_001001790:-78 NM_001134485:-78 NM_001134484:-78 ENST00000321301.6:-81 uc010mlx.4:-81 |
TATA-Box annotation
| Distance to TSS: | 91 |
|---|---|
| Nearest PromoterID: | NM_001134485 |
| Entrez ID: | 401505 |
| Nearest Unigene: | Hs.130774 |
| Nearest Refseq: | NM_001001790 |
| Nearest Ensembl: | ENSG00000175768 |
| Gene Name: | translocase of outer mitochondrial membrane 5 |
| Gene Alias: | C9orf105 |
| Gene Description: | translocase of outer mitochondrial membrane 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
