Difference between revisions of "TSS:Hg 100763.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=395 |entrez_id=6461 |gc_percent=0.766169 |gene_alias=bA3J10.2 |gene_description=SH2 domain containing adaptor protein B |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC029953:87 ENST00000540557.1:118 uc064tcy.1:118 BC136581:-254 BC136582:-254 ENST00000377707.3:-379 uc004aax.4:-379 X75342:-379 NM_003028:-381 BC094765:-420 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=87 | ||
|distance_to_tss=395 | |distance_to_tss=395 | ||
| + | |end=38068832 | ||
|entrez_id=6461 | |entrez_id=6461 | ||
|gc_percent=0.766169 | |gc_percent=0.766169 | ||
|gene_alias=bA3J10.2 | |gene_alias=bA3J10.2 | ||
|gene_description=SH2 domain containing adaptor protein B | |gene_description=SH2 domain containing adaptor protein B | ||
| − | |gene_name=SHB | + | |gene_id=6461 |
| + | |gene_name=Src homology 2 domain containing adaptor protein B | ||
| + | |gene_source=HGNC:10838 | ||
| + | |gene_symbol=SHB | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10838 | ||
|nearest_ensembl=ENSG00000107338 | |nearest_ensembl=ENSG00000107338 | ||
|nearest_promoter_id=NM_003028 | |nearest_promoter_id=NM_003028 | ||
|nearest_refseq=NM_003028 | |nearest_refseq=NM_003028 | ||
|nearest_unigene=Hs.521482 | |nearest_unigene=Hs.521482 | ||
| + | |num_trans=10 | ||
| + | |species=human | ||
| + | |start=38068804 | ||
| + | |strand=- | ||
| + | |transcript_name=BC029953 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100763.1 | |tss_id=hg_100763.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:14, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC029953 |
|---|---|
| Distance: | 87 |
| Num_trans: | 10 |
| All_trans: | BC029953:87 ENST00000540557.1:118 uc064tcy.1:118 BC136581:-254 BC136582:-254 ENST00000377707.3:-379 uc004aax.4:-379 X75342:-379 NM_003028:-381 BC094765:-420 |
TATA-Box annotation
| Distance to TSS: | 395 |
|---|---|
| Nearest PromoterID: | NM_003028 |
| Entrez ID: | 6461 |
| Nearest Unigene: | Hs.521482 |
| Nearest Refseq: | NM_003028 |
| Nearest Ensembl: | ENSG00000107338 |
| Gene Name: | Src homology 2 domain containing adaptor protein B |
| Gene Alias: | bA3J10.2 |
| Gene Description: | SH2 domain containing adaptor protein B |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.766169 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
