Difference between revisions of "TSS:Hg 100785.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=-358 |entrez_id=595135 |gc_percent=0.59204 |gene_alias=- |gene_description=phosphoglucomutase 5 pseudogene 2 |gene_name=PGM5P2...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NR_002836:349 ENST00000613141.1:357 uc004aff.5:357 BC007887:357 BC025351:357 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=349 | ||
|distance_to_tss=-358 | |distance_to_tss=-358 | ||
| + | |end=41074992 | ||
|entrez_id=595135 | |entrez_id=595135 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=phosphoglucomutase 5 pseudogene 2 | |gene_description=phosphoglucomutase 5 pseudogene 2 | ||
| − | |gene_name=PGM5P2 | + | |gene_id=595135 |
| + | |gene_name=phosphoglucomutase 5 pseudogene 2 | ||
| + | |gene_source=HGNC:18965 | ||
| + | |gene_symbol=PGM5P2 | ||
| + | |gene_synonyms= | ||
|gene_type=pseudo | |gene_type=pseudo | ||
| + | |hgnc_mgi_id=HGNC:18965 | ||
|nearest_ensembl=ENSG00000277778 | |nearest_ensembl=ENSG00000277778 | ||
|nearest_promoter_id=NR_002836 | |nearest_promoter_id=NR_002836 | ||
|nearest_refseq=NR_002836 | |nearest_refseq=NR_002836 | ||
|nearest_unigene=Hs.571593 | |nearest_unigene=Hs.571593 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=41074973 | ||
| + | |strand=- | ||
| + | |transcript_name=NR_002836 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100785.1 | |tss_id=hg_100785.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:15, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NR_002836 |
|---|---|
| Distance: | 349 |
| Num_trans: | 5 |
| All_trans: | NR_002836:349 ENST00000613141.1:357 uc004aff.5:357 BC007887:357 BC025351:357 |
TATA-Box annotation
| Distance to TSS: | -358 |
|---|---|
| Nearest PromoterID: | NR_002836 |
| Entrez ID: | 595135 |
| Nearest Unigene: | Hs.571593 |
| Nearest Refseq: | NR_002836 |
| Nearest Ensembl: | ENSG00000277778 |
| Gene Name: | phosphoglucomutase 5 pseudogene 2 |
| Gene Alias: | - |
| Gene Description: | phosphoglucomutase 5 pseudogene 2 |
| Gene Type: | pseudo |
| CpG%: | 0.065 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
