Difference between revisions of "TSS:Hg 10079.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-19 |entrez_id=10911 |gc_percent=0.39801 |gene_alias=PRO1068|U-II|UCN2|UII |gene_description=urotensin 2 |gene_name=UTS2 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |U-II= | ||
| + | |UCN2= | ||
| + | |UII= | ||
| + | |all_trans=NM_006786:11 AY358375:11 ENST00000361696.9:20 uc001aor.4:20 AF104118:20 HQ258706:-248 ENST00000054668.5:-359 uc001aos.4:-359 AF140630:-359 NM_021995:-419 BC126443:-419 BC171734:-419 ENST00000377516.6:-440 uc057bxy.1:-440 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=11 | ||
|distance_to_tss=-19 | |distance_to_tss=-19 | ||
| + | |end=7853072 | ||
|entrez_id=10911 | |entrez_id=10911 | ||
|gc_percent=0.39801 | |gc_percent=0.39801 | ||
|gene_alias=PRO1068|U-II|UCN2|UII | |gene_alias=PRO1068|U-II|UCN2|UII | ||
|gene_description=urotensin 2 | |gene_description=urotensin 2 | ||
| − | |gene_name=UTS2 | + | |gene_id=10911 |
| + | |gene_name=urotensin 2 | ||
| + | |gene_source=HGNC:12636 | ||
| + | |gene_symbol=UTS2 | ||
| + | |gene_synonyms=PRO1068 U-II UCN2 UII | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:12636 | ||
|nearest_ensembl=ENSG00000049247 | |nearest_ensembl=ENSG00000049247 | ||
|nearest_promoter_id=NM_006786 | |nearest_promoter_id=NM_006786 | ||
|nearest_refseq=NM_006786 | |nearest_refseq=NM_006786 | ||
|nearest_unigene=Hs.715862 | |nearest_unigene=Hs.715862 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=7853054 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_006786 AY358375 | ||
| + | |tss_classification=no | ||
|tss_id=hg_10079.1 | |tss_id=hg_10079.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O95399 | ||
}} | }} | ||
Revision as of 18:15, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_006786 AY358375 |
|---|---|
| Distance: | 11 |
| Num_trans: | 14 |
| All_trans: | NM_006786:11 AY358375:11 ENST00000361696.9:20 uc001aor.4:20 AF104118:20 HQ258706:-248 ENST00000054668.5:-359 uc001aos.4:-359 AF140630:-359 NM_021995:-419 BC126443:-419 BC171734:-419 ENST00000377516.6:-440 uc057bxy.1:-440 |
TATA-Box annotation
| Distance to TSS: | -19 |
|---|---|
| Nearest PromoterID: | NM_006786 |
| Entrez ID: | 10911 |
| Nearest Unigene: | Hs.715862 |
| Nearest Refseq: | NM_006786 |
| Nearest Ensembl: | ENSG00000049247 |
| Gene Name: | urotensin 2 |
| Gene Alias: | PRO1068 |
| Gene Description: | urotensin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.39801 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
