Difference between revisions of "TSS:Hg 100824.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.175 |distance_to_tss=-124 |entrez_id=320 |gc_percent=0.810945 |gene_alias=D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA |gene_description=amyloid beta precu...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LIN10= | ||
| + | |MINT1= | ||
| + | |X11= | ||
| + | |X11A= | ||
| + | |X11ALPHA= | ||
| + | |all_trans=NM_001163:95 ENST00000265381.6:148 uc004ahh.3:148 AF047347:148 AF029106:173 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| + | |distance=95 | ||
|distance_to_tss=-124 | |distance_to_tss=-124 | ||
| + | |end=69672512 | ||
|entrez_id=320 | |entrez_id=320 | ||
|gc_percent=0.810945 | |gc_percent=0.810945 | ||
|gene_alias=D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA | |gene_alias=D9S411E|LIN10|MINT1|X11|X11A|X11ALPHA | ||
|gene_description=amyloid beta precursor protein binding family A member 1 | |gene_description=amyloid beta precursor protein binding family A member 1 | ||
| − | |gene_name=APBA1 | + | |gene_id=320 |
| + | |gene_name=amyloid beta precursor protein binding family A member 1 | ||
| + | |gene_source=HGNC:578 | ||
| + | |gene_symbol=APBA1 | ||
| + | |gene_synonyms=D9S411E X11 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:578 | ||
|nearest_ensembl=ENSG00000107282 | |nearest_ensembl=ENSG00000107282 | ||
|nearest_promoter_id=NM_001163 | |nearest_promoter_id=NM_001163 | ||
|nearest_refseq=NM_001163 | |nearest_refseq=NM_001163 | ||
|nearest_unigene=Hs.171939 | |nearest_unigene=Hs.171939 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=69672453 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001163 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100824.1 | |tss_id=hg_100824.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q02410 | ||
}} | }} | ||
Revision as of 18:17, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001163 |
|---|---|
| Distance: | 95 |
| Num_trans: | 5 |
| All_trans: | NM_001163:95 ENST00000265381.6:148 uc004ahh.3:148 AF047347:148 AF029106:173 |
TATA-Box annotation
| Distance to TSS: | -124 |
|---|---|
| Nearest PromoterID: | NM_001163 |
| Entrez ID: | 320 |
| Nearest Unigene: | Hs.171939 |
| Nearest Refseq: | NM_001163 |
| Nearest Ensembl: | ENSG00000107282 |
| Gene Name: | amyloid beta precursor protein binding family A member 1 |
| Gene Alias: | D9S411E |
| Gene Description: | amyloid beta precursor protein binding family A member 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.810945 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
