Difference between revisions of "TSS:Hg 100828.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.195 |distance_to_tss=-77 |entrez_id=375743 |gc_percent=0.776119 |gene_alias=- |gene_description=protein prenyltransferase alpha subunit repeat conta...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001099666:70 ENST00000472967.2:71 uc064tpt.1:71 ENST00000474925.2:75 uc064tps.1:75 ENST00000340434.4:88 uc004ahj.5:88 BC053622:88 ENST00000377200.9:89 uc004ahi.4:89 AL832683:89 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.195 | |cpg_percent=0.195 | ||
| + | |distance=70 | ||
|distance_to_tss=-77 | |distance_to_tss=-77 | ||
| + | |end=69760045 | ||
|entrez_id=375743 | |entrez_id=375743 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=protein prenyltransferase alpha subunit repeat containing 1 | |gene_description=protein prenyltransferase alpha subunit repeat containing 1 | ||
| − | |gene_name=PTAR1 | + | |gene_id=375743 |
| + | |gene_name=protein prenyltransferase alpha subunit repeat containing 1 | ||
| + | |gene_source=HGNC:30449 | ||
| + | |gene_symbol=PTAR1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30449 | ||
|nearest_ensembl=ENSG00000188647 | |nearest_ensembl=ENSG00000188647 | ||
|nearest_promoter_id=NM_001099666 | |nearest_promoter_id=NM_001099666 | ||
|nearest_refseq=NM_001099666 | |nearest_refseq=NM_001099666 | ||
|nearest_unigene=Hs.744192 | |nearest_unigene=Hs.744192 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=69760029 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_001099666 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100828.1 | |tss_id=hg_100828.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7Z6K3 | ||
}} | }} | ||
Revision as of 18:17, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001099666 |
|---|---|
| Distance: | 70 |
| Num_trans: | 11 |
| All_trans: | NM_001099666:70 ENST00000472967.2:71 uc064tpt.1:71 ENST00000474925.2:75 uc064tps.1:75 ENST00000340434.4:88 uc004ahj.5:88 BC053622:88 ENST00000377200.9:89 uc004ahi.4:89 AL832683:89 |
TATA-Box annotation
| Distance to TSS: | -77 |
|---|---|
| Nearest PromoterID: | NM_001099666 |
| Entrez ID: | 375743 |
| Nearest Unigene: | Hs.744192 |
| Nearest Refseq: | NM_001099666 |
| Nearest Ensembl: | ENSG00000188647 |
| Gene Name: | protein prenyltransferase alpha subunit repeat containing 1 |
| Gene Alias: | - |
| Gene Description: | protein prenyltransferase alpha subunit repeat containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.195 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
