Difference between revisions of "TSS:Hg 100929.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=1154 |entrez_id=23670 |gc_percent=0.542289 |gene_alias=- |gene_description=transmembrane protein 2 |gene_name=TMEM2 |gene_type=...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance= | ||
|distance_to_tss=1154 | |distance_to_tss=1154 | ||
| + | |end=71767737 | ||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=71767723 | ||
| + | |strand=- | ||
|tata_box="-56(GGCTTTAAAATC,-,0.00),-55(GCTTTAAAATCG,+,0.00)" | |tata_box="-56(GGCTTTAAAATC,-,0.00),-55(GCTTTAAAATCG,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100929.1 | |tss_id=hg_100929.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 18:21, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1154 |
|---|---|
| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | TMEM2 |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-56(GGCTTTAAAATC,-,0.00),-55(GCTTTAAAATCG,+,0.00)" |
