Difference between revisions of "TSS:Hg 100932.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=372 |entrez_id=23670 |gc_percent=0.666667 |gene_alias=- |gene_description=transmembrane protein 2 |gene_name=TMEM2 |gene_type=p...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000543165.1:0 uc064trx.1:0 AK300405:0 AF137030:12 AK056807:-26 AB037833:27 BC146780:27 ENST00000377066.9:118 ENST00000542935.5:118 uc010mos.3:118 uc064trr.1:118 BC140773:118 BC144510:118 BC171782:118 ENST00000377044.8:-363 NM_013390:-363 NM_001135820:-363 uc011lsa.1:-363 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=372 | |distance_to_tss=372 | ||
| + | |end=71768521 | ||
|entrez_id=23670 | |entrez_id=23670 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=transmembrane protein 2 | |gene_description=transmembrane protein 2 | ||
| − | |gene_name=TMEM2 | + | |gene_id=23670 |
| + | |gene_name=transmembrane protein 2 | ||
| + | |gene_source=HGNC:11869 | ||
| + | |gene_symbol=TMEM2 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11869 | ||
|nearest_ensembl=ENSG00000135048 | |nearest_ensembl=ENSG00000135048 | ||
|nearest_promoter_id=NM_001135820 | |nearest_promoter_id=NM_001135820 | ||
|nearest_refseq=NM_013390 | |nearest_refseq=NM_013390 | ||
|nearest_unigene=Hs.494146 | |nearest_unigene=Hs.494146 | ||
| + | |num_trans=18 | ||
| + | |species=human | ||
| + | |start=71768503 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000543165.1 uc064trx.1 AK300405 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100932.1 | |tss_id=hg_100932.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DTX3 | ||
}} | }} | ||
Revision as of 18:21, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000543165.1 uc064trx.1 AK300405 |
|---|---|
| Distance: | 0 |
| Num_trans: | 18 |
| All_trans: | ENST00000543165.1:0 uc064trx.1:0 AK300405:0 AF137030:12 AK056807:-26 AB037833:27 BC146780:27 ENST00000377066.9:118 ENST00000542935.5:118 uc010mos.3:118 uc064trr.1:118 BC140773:118 BC144510:118 BC171782:118 ENST00000377044.8:-363 NM_013390:-363 NM_001135820:-363 uc011lsa.1:-363 |
TATA-Box annotation
| Distance to TSS: | 372 |
|---|---|
| Nearest PromoterID: | NM_001135820 |
| Entrez ID: | 23670 |
| Nearest Unigene: | Hs.494146 |
| Nearest Refseq: | NM_013390 |
| Nearest Ensembl: | ENSG00000135048 |
| Gene Name: | transmembrane protein 2 |
| Gene Alias: | - |
| Gene Description: | transmembrane protein 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
