Difference between revisions of "TSS:Hg 100949.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.165 |distance_to_tss=37 |entrez_id=7763 |gc_percent=0.771144 |gene_alias=ZA20D2|ZFAND5A|ZNF216 |gene_description=zinc finger AN1-type containing 5 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZFAND5A= | ||
| + | |ZNF216= | ||
| + | |all_trans=ENST00000376962.9:2 uc004aix.3:2 BC027707:2 ENST00000376960.8:-13 uc004aiy.3:-13 NM_001102421:-25 NM_001102420:-25 NM_006007:-25 BC011018:116 ENST00000487330.1:223 uc064tsq.1:223 AF062346:228 BC073131:451 AK025782:489 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.165 | |cpg_percent=0.165 | ||
| + | |distance=2 | ||
|distance_to_tss=37 | |distance_to_tss=37 | ||
| + | |end=72365222 | ||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
|gene_alias=ZA20D2|ZFAND5A|ZNF216 | |gene_alias=ZA20D2|ZFAND5A|ZNF216 | ||
|gene_description=zinc finger AN1-type containing 5 | |gene_description=zinc finger AN1-type containing 5 | ||
| − | |gene_name=ZFAND5 | + | |gene_id=7763 |
| + | |gene_name=zinc finger AN1-type containing 5 | ||
| + | |gene_source=HGNC:13008 | ||
| + | |gene_symbol=ZFAND5 | ||
| + | |gene_synonyms=ZFAND5A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13008 | ||
|nearest_ensembl=ENSG00000107372 | |nearest_ensembl=ENSG00000107372 | ||
|nearest_promoter_id=NM_001102421 | |nearest_promoter_id=NM_001102421 | ||
|nearest_refseq=NM_006007 | |nearest_refseq=NM_006007 | ||
|nearest_unigene=Hs.406096 | |nearest_unigene=Hs.406096 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=72365198 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376962.9 uc004aix.3 BC027707 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100949.1 | |tss_id=hg_100949.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R219 O76080 | ||
}} | }} | ||
Revision as of 18:22, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376962.9 uc004aix.3 BC027707 |
|---|---|
| Distance: | 2 |
| Num_trans: | 14 |
| All_trans: | ENST00000376962.9:2 uc004aix.3:2 BC027707:2 ENST00000376960.8:-13 uc004aiy.3:-13 NM_001102421:-25 NM_001102420:-25 NM_006007:-25 BC011018:116 ENST00000487330.1:223 uc064tsq.1:223 AF062346:228 BC073131:451 AK025782:489 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NM_001102421 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | zinc finger AN1-type containing 5 |
| Gene Alias: | ZA20D2 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.165 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
