Difference between revisions of "TSS:Hg 100951.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=-394 |entrez_id=7763 |gc_percent=0.542289 |gene_alias=ZA20D2|ZFAND5A|ZNF216 |gene_description=zinc finger AN1-type containing 5...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ZFAND5A= | ||
| + | |ZNF216= | ||
| + | |all_trans=NM_001102421:393 NM_001102420:393 NM_006007:393 ENST00000376960.8:405 uc004aiy.3:405 ENST00000376962.9:443 uc004aix.3:443 BC027707:443 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| + | |distance=393 | ||
|distance_to_tss=-394 | |distance_to_tss=-394 | ||
| + | |end=72365643 | ||
|entrez_id=7763 | |entrez_id=7763 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
|gene_alias=ZA20D2|ZFAND5A|ZNF216 | |gene_alias=ZA20D2|ZFAND5A|ZNF216 | ||
|gene_description=zinc finger AN1-type containing 5 | |gene_description=zinc finger AN1-type containing 5 | ||
| − | |gene_name=ZFAND5 | + | |gene_id=7763 |
| + | |gene_name=zinc finger AN1-type containing 5 | ||
| + | |gene_source=HGNC:13008 | ||
| + | |gene_symbol=ZFAND5 | ||
| + | |gene_synonyms=ZFAND5A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:13008 | ||
|nearest_ensembl=ENSG00000107372 | |nearest_ensembl=ENSG00000107372 | ||
|nearest_promoter_id=NM_006007 | |nearest_promoter_id=NM_006007 | ||
|nearest_refseq=NM_006007 | |nearest_refseq=NM_006007 | ||
|nearest_unigene=Hs.406096 | |nearest_unigene=Hs.406096 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=72365639 | ||
| + | |strand=- | ||
|tata_box="13(CCTTTTCTGGGG,+,0.00)" | |tata_box="13(CCTTTTCTGGGG,+,0.00)" | ||
| + | |transcript_name=NM_001102421 NM_001102420 NM_006007 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100951.1 | |tss_id=hg_100951.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=O76080 | ||
}} | }} | ||
Revision as of 18:22, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_001102421 NM_001102420 NM_006007 |
|---|---|
| Distance: | 393 |
| Num_trans: | 8 |
| All_trans: | NM_001102421:393 NM_001102420:393 NM_006007:393 ENST00000376960.8:405 uc004aiy.3:405 ENST00000376962.9:443 uc004aix.3:443 BC027707:443 |
TATA-Box annotation
| Distance to TSS: | -394 |
|---|---|
| Nearest PromoterID: | NM_006007 |
| Entrez ID: | 7763 |
| Nearest Unigene: | Hs.406096 |
| Nearest Refseq: | NM_006007 |
| Nearest Ensembl: | ENSG00000107372 |
| Gene Name: | zinc finger AN1-type containing 5 |
| Gene Alias: | ZA20D2 |
| Gene Description: | zinc finger AN1-type containing 5 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "13(CCTTTTCTGGGG,+,0.00)" |
