Difference between revisions of "TSS:Hg 10097.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.155 |distance_to_tss=24 |entrez_id=54206 |gc_percent=0.761194 |gene_alias=GENE-33|MIG-6|MIG6|RALT |gene_description=ERBB receptor feedback inhibitor...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |MIG-6= | ||
| + | |MIG6= | ||
| + | |RALT= | ||
| + | |all_trans=ENST00000377482.9:0 uc001aoz.4:0 AK096149:0 ENST00000469499.5:5 ENST00000487559.1:5 uc057bym.1:5 uc057byn.1:5 BC025337:5 AK315718:13 NM_018948:-15 ENST00000474874.5:18 uc057byk.1:18 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.155 | |cpg_percent=0.155 | ||
| + | |distance=0 | ||
|distance_to_tss=24 | |distance_to_tss=24 | ||
| + | |end=8026318 | ||
|entrez_id=54206 | |entrez_id=54206 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
|gene_alias=GENE-33|MIG-6|MIG6|RALT | |gene_alias=GENE-33|MIG-6|MIG6|RALT | ||
|gene_description=ERBB receptor feedback inhibitor 1 | |gene_description=ERBB receptor feedback inhibitor 1 | ||
| − | |gene_name=ERRFI1 | + | |gene_id=54206 |
| + | |gene_name=ERBB receptor feedback inhibitor 1 | ||
| + | |gene_source=HGNC:18185 | ||
| + | |gene_symbol=ERRFI1 | ||
| + | |gene_synonyms=GENE-33 MIG-6 RALT | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:18185 | ||
|nearest_ensembl=ENSG00000116285 | |nearest_ensembl=ENSG00000116285 | ||
|nearest_promoter_id=NM_018948 | |nearest_promoter_id=NM_018948 | ||
|nearest_refseq=NM_018948 | |nearest_refseq=NM_018948 | ||
|nearest_unigene=Hs.605445 | |nearest_unigene=Hs.605445 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=8026300 | ||
| + | |strand=- | ||
|tata_box="-32(CTATATATAGAG,+,0.00)" | |tata_box="-32(CTATATATAGAG,+,0.00)" | ||
| + | |transcript_name=ENST00000377482.9 uc001aoz.4 AK096149 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10097.1 | |tss_id=hg_10097.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B3KTV8 I6S2Y9 Q9UJM3 | ||
}} | }} | ||
Revision as of 18:23, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000377482.9 uc001aoz.4 AK096149 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000377482.9:0 uc001aoz.4:0 AK096149:0 ENST00000469499.5:5 ENST00000487559.1:5 uc057bym.1:5 uc057byn.1:5 BC025337:5 AK315718:13 NM_018948:-15 ENST00000474874.5:18 uc057byk.1:18 |
TATA-Box annotation
| Distance to TSS: | 24 |
|---|---|
| Nearest PromoterID: | NM_018948 |
| Entrez ID: | 54206 |
| Nearest Unigene: | Hs.605445 |
| Nearest Refseq: | NM_018948 |
| Nearest Ensembl: | ENSG00000116285 |
| Gene Name: | ERBB receptor feedback inhibitor 1 |
| Gene Alias: | GENE-33 |
| Gene Description: | ERBB receptor feedback inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.155 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(CTATATATAGAG,+,0.00)" |
