Difference between revisions of "TSS:Hg 100998.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=-71301 |entrez_id=301 |gc_percent=0.557214 |gene_alias=ANX1|LPC1 |gene_description=annexin A1 |gene_name=ANXA1 |gene_type=prote...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |LPC1= | ||
| + | |all_trans=ENST00000419959.5:0 uc064ttb.1:0 AK293176:0 ENST00000493311.1:13 uc064tte.1:13 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=0 | ||
|distance_to_tss=-71301 | |distance_to_tss=-71301 | ||
| + | |end=73080453 | ||
|entrez_id=301 | |entrez_id=301 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
|gene_alias=ANX1|LPC1 | |gene_alias=ANX1|LPC1 | ||
|gene_description=annexin A1 | |gene_description=annexin A1 | ||
| − | |gene_name= | + | |gene_id=216 |
| + | |gene_name=aldehyde dehydrogenase 1 family member A1 | ||
| + | |gene_source=HGNC:402 | ||
| + | |gene_symbol=ALDH1A1 | ||
| + | |gene_synonyms=RALDH1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:402 | ||
|nearest_ensembl=ENSG00000135046 | |nearest_ensembl=ENSG00000135046 | ||
|nearest_promoter_id=NM_000700 | |nearest_promoter_id=NM_000700 | ||
|nearest_refseq=NM_000700 | |nearest_refseq=NM_000700 | ||
|nearest_unigene=Hs.494173 | |nearest_unigene=Hs.494173 | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=73080407 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000419959.5 uc064ttb.1 AK293176 | ||
| + | |tss_classification=no | ||
|tss_id=hg_100998.1 | |tss_id=hg_100998.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B4DDF8 Q5SYQ8 | ||
}} | }} | ||
Revision as of 18:24, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000419959.5 uc064ttb.1 AK293176 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000419959.5:0 uc064ttb.1:0 AK293176:0 ENST00000493311.1:13 uc064tte.1:13 |
TATA-Box annotation
| Distance to TSS: | -71301 |
|---|---|
| Nearest PromoterID: | NM_000700 |
| Entrez ID: | 301 |
| Nearest Unigene: | Hs.494173 |
| Nearest Refseq: | NM_000700 |
| Nearest Ensembl: | ENSG00000135046 |
| Gene Name: | aldehyde dehydrogenase 1 family member A1 |
| Gene Alias: | ANX1 |
| Gene Description: | annexin A1 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
