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Difference between revisions of "TSS:Hg 101012.1"

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(Created page with "{{TSSDetail |cpg_percent=0.045 |distance_to_tss=-924 |entrez_id=103752585 |gc_percent=0.606965 |gene_alias=- |gene_description=RORB antisense RNA 1 |gene_name=RORB-AS1 |gene_t...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|all_trans=ENST00000417576.2:343 uc064tto.1:343
 +
|chr=chr9
 
|cpg_percent=0.045
 
|cpg_percent=0.045
 +
|distance=343
 
|distance_to_tss=-924
 
|distance_to_tss=-924
 +
|end=74499484
 
|entrez_id=103752585
 
|entrez_id=103752585
 
|gc_percent=0.606965
 
|gc_percent=0.606965
 
|gene_alias=-
 
|gene_alias=-
 
|gene_description=RORB antisense RNA 1
 
|gene_description=RORB antisense RNA 1
|gene_name=RORB-AS1
+
|gene_id=103752585
 +
|gene_name=RORB antisense RNA 1
 +
|gene_source=HGNC:49803
 +
|gene_symbol=RORB-AS1
 +
|gene_synonyms=
 
|gene_type=ncRNA
 
|gene_type=ncRNA
 +
|hgnc_mgi_id=HGNC:49803
 
|nearest_ensembl=
 
|nearest_ensembl=
 
|nearest_promoter_id=NR_125791
 
|nearest_promoter_id=NR_125791
 
|nearest_refseq=NR_125791
 
|nearest_refseq=NR_125791
 
|nearest_unigene=Hs.635501
 
|nearest_unigene=Hs.635501
 +
|num_trans=2
 +
|species=human
 +
|start=74499469
 +
|strand=-
 +
|transcript_name=ENST00000417576.2 uc064tto.1
 +
|tss_classification=no
 
|tss_id=hg_101012.1
 
|tss_id=hg_101012.1
 +
|tss_score=1
 +
|uniprot_id=
 
}}
 
}}

Revision as of 18:25, 8 March 2018

Basic information about the TSS


TSS ID:hg_101012.1
Species:human
Chr:chr9
TSS Classification:no
Start:74499469
End:74499484
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000417576.2 uc064tto.1
Distance:343
GeneID:103752585
HGNC/MGI_ID:HGNC:49803
UniProt_ID:
Gene_name:RORB antisense RNA 1
Gene_symbol:RORB-AS1
Gene_synonyms:
Gene_source:HGNC:49803



Transcript annotation


Transcript_name:ENST00000417576.2 uc064tto.1
Distance:343
Num_trans:2
All_trans:ENST00000417576.2:343 uc064tto.1:343



TATA-Box annotation


Distance to TSS:-924
Nearest PromoterID:NR_125791
Entrez ID:103752585
Nearest Unigene:Hs.635501
Nearest Refseq:NR_125791
Nearest Ensembl:
Gene Name:RORB antisense RNA 1
Gene Alias:-
Gene Description:RORB antisense RNA 1
Gene Type:ncRNA
CpG%:0.045
GC%:0.606965
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):