Difference between revisions of "TSS:Hg 101070.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=-257 |entrez_id=100286938 |gc_percent=0.686567 |gene_alias=- |gene_description=VPS13A antisense RNA 1 |gene_name=VPS13A-AS1 |gene...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000415172.1:169 uc022bij.2:169 NR_026668:246 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=169 | ||
|distance_to_tss=-257 | |distance_to_tss=-257 | ||
| + | |end=77178185 | ||
|entrez_id=100286938 | |entrez_id=100286938 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=VPS13A antisense RNA 1 | |gene_description=VPS13A antisense RNA 1 | ||
| − | |gene_name=VPS13A-AS1 | + | |gene_id=100286938 |
| + | |gene_name=VPS13A antisense RNA 1 | ||
| + | |gene_source=HGNC:44167 | ||
| + | |gene_symbol=VPS13A-AS1 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:44167 | ||
|nearest_ensembl=ENSG00000232998 | |nearest_ensembl=ENSG00000232998 | ||
|nearest_promoter_id=NR_026668 | |nearest_promoter_id=NR_026668 | ||
|nearest_refseq=NR_026668 | |nearest_refseq=NR_026668 | ||
|nearest_unigene=Hs.662256 | |nearest_unigene=Hs.662256 | ||
| + | |num_trans=3 | ||
| + | |species=human | ||
| + | |start=77178162 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000415172.1 uc022bij.2 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101070.1 | |tss_id=hg_101070.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:27, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000415172.1 uc022bij.2 |
|---|---|
| Distance: | 169 |
| Num_trans: | 3 |
| All_trans: | ENST00000415172.1:169 uc022bij.2:169 NR_026668:246 |
TATA-Box annotation
| Distance to TSS: | -257 |
|---|---|
| Nearest PromoterID: | NR_026668 |
| Entrez ID: | 100286938 |
| Nearest Unigene: | Hs.662256 |
| Nearest Refseq: | NR_026668 |
| Nearest Ensembl: | ENSG00000232998 |
| Gene Name: | VPS13A antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | VPS13A antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
