Difference between revisions of "TSS:Hg 101096.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-517 |entrez_id=2776 |gc_percent=0.691542 |gene_alias=CMC1|G-ALPHA-q|GAQ|SWS |gene_description=G protein subunit alpha q |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |G-ALPHA-q= | ||
| + | |GAQ= | ||
| + | |SWS= | ||
| + | |all_trans=ENST00000286548.8:470 uc004akw.5:470 U43083:473 NM_002072:479 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=470 | ||
|distance_to_tss=-517 | |distance_to_tss=-517 | ||
| + | |end=78032005 | ||
|entrez_id=2776 | |entrez_id=2776 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=CMC1|G-ALPHA-q|GAQ|SWS | |gene_alias=CMC1|G-ALPHA-q|GAQ|SWS | ||
|gene_description=G protein subunit alpha q | |gene_description=G protein subunit alpha q | ||
| − | |gene_name=GNAQ | + | |gene_id=2776 |
| + | |gene_name=G protein subunit alpha q | ||
| + | |gene_source=HGNC:4390 | ||
| + | |gene_symbol=GNAQ | ||
| + | |gene_synonyms=G-ALPHA-q GAQ | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:4390 | ||
|nearest_ensembl=ENSG00000156052 | |nearest_ensembl=ENSG00000156052 | ||
|nearest_promoter_id=NM_002072 | |nearest_promoter_id=NM_002072 | ||
|nearest_refseq=NM_002072 | |nearest_refseq=NM_002072 | ||
|nearest_unigene=Hs.269782 | |nearest_unigene=Hs.269782 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=78031927 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000286548.8 uc004akw.5 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101096.1 | |tss_id=hg_101096.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R240 P50148 | ||
}} | }} | ||
Revision as of 18:28, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000286548.8 uc004akw.5 |
|---|---|
| Distance: | 470 |
| Num_trans: | 4 |
| All_trans: | ENST00000286548.8:470 uc004akw.5:470 U43083:473 NM_002072:479 |
TATA-Box annotation
| Distance to TSS: | -517 |
|---|---|
| Nearest PromoterID: | NM_002072 |
| Entrez ID: | 2776 |
| Nearest Unigene: | Hs.269782 |
| Nearest Refseq: | NM_002072 |
| Nearest Ensembl: | ENSG00000156052 |
| Gene Name: | G protein subunit alpha q |
| Gene Alias: | CMC1 |
| Gene Description: | G protein subunit alpha q |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
