Difference between revisions of "TSS:Hg 101139.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-26467 |entrez_id=414328 |gc_percent=0.373134 |gene_alias=C9orf103|bA522I20.2|hGntK |gene_description="IDNK, gluconokinase" |gen...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000362613.1:0 uc064tyx.1:0 | ||
| + | |bA522I20.2= | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=0 | ||
|distance_to_tss=-26467 | |distance_to_tss=-26467 | ||
| + | |end=83596584 | ||
|entrez_id=414328 | |entrez_id=414328 | ||
|gc_percent=0.373134 | |gc_percent=0.373134 | ||
|gene_alias=C9orf103|bA522I20.2|hGntK | |gene_alias=C9orf103|bA522I20.2|hGntK | ||
|gene_description="IDNK, gluconokinase" | |gene_description="IDNK, gluconokinase" | ||
| − | |gene_name= | + | |gene_id= |
| + | |gene_name="RNA, U4 small nuclear 15, pseudogene" | ||
| + | |gene_source=HGNC:46951 | ||
| + | |gene_symbol=RNU4-15P | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hGntK= | ||
| + | |hgnc_mgi_id=HGNC:46951 | ||
|nearest_ensembl=ENSG00000148057 | |nearest_ensembl=ENSG00000148057 | ||
|nearest_promoter_id=NR_046422 | |nearest_promoter_id=NR_046422 | ||
|nearest_refseq=NM_001001551 | |nearest_refseq=NM_001001551 | ||
|nearest_unigene=Hs.530261 | |nearest_unigene=Hs.530261 | ||
| + | |num_trans=2 | ||
| + | |species=human | ||
| + | |start=83596580 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000362613.1 uc064tyx.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101139.1 | |tss_id=hg_101139.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:30, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000362613.1 uc064tyx.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000362613.1:0 uc064tyx.1:0 |
TATA-Box annotation
| Distance to TSS: | -26467 |
|---|---|
| Nearest PromoterID: | NR_046422 |
| Entrez ID: | 414328 |
| Nearest Unigene: | Hs.530261 |
| Nearest Refseq: | NM_001001551 |
| Nearest Ensembl: | ENSG00000148057 |
| Gene Name: | "RNA, U4 small nuclear 15, pseudogene" |
| Gene Alias: | C9orf103 |
| Gene Description: | "IDNK, gluconokinase" |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.373134 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
