Difference between revisions of "TSS:Hg 101165.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-955 |entrez_id=407043 |gc_percent=0.363184 |gene_alias=MIRN7-1|hsa-mir-7-1|mir-7-1 |gene_description=microRNA 7-1 |gene_name=MI...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000493362.1:13 uc064uah.1:13 ENST00000492865.1:-321 uc064uai.1:-321 ENST00000481820.6:-469 uc064uaj.1:-469 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| + | |distance=13 | ||
|distance_to_tss=-955 | |distance_to_tss=-955 | ||
| + | |end=83970825 | ||
|entrez_id=407043 | |entrez_id=407043 | ||
|gc_percent=0.363184 | |gc_percent=0.363184 | ||
|gene_alias=MIRN7-1|hsa-mir-7-1|mir-7-1 | |gene_alias=MIRN7-1|hsa-mir-7-1|mir-7-1 | ||
|gene_description=microRNA 7-1 | |gene_description=microRNA 7-1 | ||
| − | |gene_name= | + | |gene_id=3190 |
| + | |gene_name=heterogeneous nuclear ribonucleoprotein K | ||
| + | |gene_source=HGNC:5044 | ||
| + | |gene_symbol=HNRNPK | ||
| + | |gene_synonyms=CSBP TUNP | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:5044 | ||
| + | |hsa-mir-7-1= | ||
| + | |mir-7-1= | ||
|nearest_ensembl=ENSG00000165119 | |nearest_ensembl=ENSG00000165119 | ||
|nearest_promoter_id=NR_029605 | |nearest_promoter_id=NR_029605 | ||
|nearest_refseq=NR_029605 | |nearest_refseq=NR_029605 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=83970798 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000493362.1 uc064uah.1 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101165.1 | |tss_id=hg_101165.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:31, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000493362.1 uc064uah.1 |
|---|---|
| Distance: | 13 |
| Num_trans: | 6 |
| All_trans: | ENST00000493362.1:13 uc064uah.1:13 ENST00000492865.1:-321 uc064uai.1:-321 ENST00000481820.6:-469 uc064uaj.1:-469 |
TATA-Box annotation
| Distance to TSS: | -955 |
|---|---|
| Nearest PromoterID: | NR_029605 |
| Entrez ID: | 407043 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_029605 |
| Nearest Ensembl: | ENSG00000165119 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein K |
| Gene Alias: | MIRN7-1 |
| Gene Description: | microRNA 7-1 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
