Difference between revisions of "TSS:Hg 101174.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.085 |distance_to_tss=-110 |entrez_id=80010 |gc_percent=0.631841 |gene_alias=BLAP75|C9orf76|FAAP75 |gene_description=RecQ mediated genome instability...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |C9orf76= | ||
| + | |FAAP75= | ||
| + | |all_trans=ENST00000376281.8:0 ENST00000472778.5:0 ENST00000483135.1:0 uc004anl.5:0 uc064uam.1:0 uc064uao.1:0 X72727:0 AK291336:0 BC014980:1 NM_002140:-147 NM_031262:-147 NM_001318186:318 NM_001318187:318 NM_001318188:318 NM_031263:318 ENST00000376263.7:320 uc004anf.5:320 ENST00000360384.9:339 uc004ang.5:339 AK294067:345 AK307962:373 AK300744:375 AK096385:381 AB209562:387 ENST00000457156.5:399 uc064uak.1:399 BC025321:399 BC000355:422 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| + | |distance=0 | ||
|distance_to_tss=-110 | |distance_to_tss=-110 | ||
| + | |end=83980635 | ||
|entrez_id=80010 | |entrez_id=80010 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=BLAP75|C9orf76|FAAP75 | |gene_alias=BLAP75|C9orf76|FAAP75 | ||
|gene_description=RecQ mediated genome instability 1 | |gene_description=RecQ mediated genome instability 1 | ||
| − | |gene_name= | + | |gene_id=3190 |
| + | |gene_name=heterogeneous nuclear ribonucleoprotein K | ||
| + | |gene_source=HGNC:5044 | ||
| + | |gene_symbol=HNRNPK | ||
| + | |gene_synonyms=CSBP TUNP | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:5044 | ||
|nearest_ensembl=ENSG00000178966 | |nearest_ensembl=ENSG00000178966 | ||
|nearest_promoter_id=NM_024945 | |nearest_promoter_id=NM_024945 | ||
|nearest_refseq=NM_024945 | |nearest_refseq=NM_024945 | ||
|nearest_unigene=Hs.726327 | |nearest_unigene=Hs.726327 | ||
| + | |num_trans=28 | ||
| + | |species=human | ||
| + | |start=83980588 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376281.8 ENST00000472778.5 ENST00000483135.1 uc004anl.5 uc064uam.1 uc064uao.1 X72727 AK291336 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101174.1 | |tss_id=hg_101174.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q6IBN1 S4R457 | ||
}} | }} | ||
Revision as of 18:32, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376281.8 ENST00000472778.5 ENST00000483135.1 uc004anl.5 uc064uam.1 uc064uao.1 X72727 AK291336 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | ENST00000376281.8:0 ENST00000472778.5:0 ENST00000483135.1:0 uc004anl.5:0 uc064uam.1:0 uc064uao.1:0 X72727:0 AK291336:0 BC014980:1 NM_002140:-147 NM_031262:-147 NM_001318186:318 NM_001318187:318 NM_001318188:318 NM_031263:318 ENST00000376263.7:320 uc004anf.5:320 ENST00000360384.9:339 uc004ang.5:339 AK294067:345 AK307962:373 AK300744:375 AK096385:381 AB209562:387 ENST00000457156.5:399 uc064uak.1:399 BC025321:399 BC000355:422 |
TATA-Box annotation
| Distance to TSS: | -110 |
|---|---|
| Nearest PromoterID: | NM_024945 |
| Entrez ID: | 80010 |
| Nearest Unigene: | Hs.726327 |
| Nearest Refseq: | NM_024945 |
| Nearest Ensembl: | ENSG00000178966 |
| Gene Name: | heterogeneous nuclear ribonucleoprotein K |
| Gene Alias: | BLAP75 |
| Gene Description: | RecQ mediated genome instability 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
