Difference between revisions of "TSS:Hg 101176.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=58 |entrez_id=64078 |gc_percent=0.532338 |gene_alias=CNT3 |gene_description=solute carrier family 28 member 3 |gene_name=SLC28A3 |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=AK310861:-23 AK304406:-32 AK314039:-33 ENST00000376238.4:35 uc010mpz.4:35 AK292849:-53 NM_001199633:-54 NR_037638:-54 BC093823:56 BC093821:56 ENST00000495823.1:59 uc064uat.1:59 KJ899433:85 | ||
| + | |chr=chr9 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| + | |distance=-23 | ||
|distance_to_tss=58 | |distance_to_tss=58 | ||
| + | |end=84340725 | ||
|entrez_id=64078 | |entrez_id=64078 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
|gene_alias=CNT3 | |gene_alias=CNT3 | ||
|gene_description=solute carrier family 28 member 3 | |gene_description=solute carrier family 28 member 3 | ||
| − | |gene_name=SLC28A3 | + | |gene_id=64078 |
| + | |gene_name=solute carrier family 28 member 3 | ||
| + | |gene_source=HGNC:16484 | ||
| + | |gene_symbol=SLC28A3 | ||
| + | |gene_synonyms=CNT3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:16484 | ||
|nearest_ensembl=ENSG00000197506 | |nearest_ensembl=ENSG00000197506 | ||
|nearest_promoter_id=NM_001199633 | |nearest_promoter_id=NM_001199633 | ||
|nearest_refseq=NM_022127 | |nearest_refseq=NM_022127 | ||
|nearest_unigene=Hs.535966 | |nearest_unigene=Hs.535966 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=84340717 | ||
| + | |strand=- | ||
| + | |transcript_name=AK310861 | ||
| + | |tss_classification=no | ||
|tss_id=hg_101176.1 | |tss_id=hg_101176.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:32, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK310861 |
|---|---|
| Distance: | -23 |
| Num_trans: | 13 |
| All_trans: | AK310861:-23 AK304406:-32 AK314039:-33 ENST00000376238.4:35 uc010mpz.4:35 AK292849:-53 NM_001199633:-54 NR_037638:-54 BC093823:56 BC093821:56 ENST00000495823.1:59 uc064uat.1:59 KJ899433:85 |
TATA-Box annotation
| Distance to TSS: | 58 |
|---|---|
| Nearest PromoterID: | NM_001199633 |
| Entrez ID: | 64078 |
| Nearest Unigene: | Hs.535966 |
| Nearest Refseq: | NM_022127 |
| Nearest Ensembl: | ENSG00000197506 |
| Gene Name: | solute carrier family 28 member 3 |
| Gene Alias: | CNT3 |
| Gene Description: | solute carrier family 28 member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
