Difference between revisions of "TSS:Hg 101190.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.14 |distance_to_tss=181 |entrez_id=23287 |gc_percent=0.756219 |gene_alias=CCP1|NNA1 |gene_description=ATP/GTP binding protein 1 |gene_name=AGTPBP1 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NNA1= | ||
| + | |all_trans=ENST00000376083.7:28 uc010mqc.4:28 ENST00000357081.7:-36 uc064uax.1:-36 AB028958:-36 ENST00000376081.8:-38 uc064uaz.1:-38 AK001544:-124 BC060815:-144 ENST00000337006.8:-179 ENST00000628899.1:-179 NM_015239:-179 NM_001286715:-179 NM_001286717:-179 uc033czo.2:-179 uc011lte.3:-179 AK295774:-179 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| + | |distance=28 | ||
|distance_to_tss=181 | |distance_to_tss=181 | ||
| + | |end=85741850 | ||
|entrez_id=23287 | |entrez_id=23287 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
|gene_alias=CCP1|NNA1 | |gene_alias=CCP1|NNA1 | ||
|gene_description=ATP/GTP binding protein 1 | |gene_description=ATP/GTP binding protein 1 | ||
| − | |gene_name=AGTPBP1 | + | |gene_id=23287 |
| + | |gene_name=ATP/GTP binding protein 1 | ||
| + | |gene_source=HGNC:17258 | ||
| + | |gene_symbol=AGTPBP1 | ||
| + | |gene_synonyms=CCP1 KIAA1035 Nna1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17258 | ||
|nearest_ensembl=ENSG00000135049 | |nearest_ensembl=ENSG00000135049 | ||
|nearest_promoter_id=NM_001286715 | |nearest_promoter_id=NM_001286715 | ||
|nearest_refseq=NM_015239 | |nearest_refseq=NM_015239 | ||
|nearest_unigene=Hs.719980 | |nearest_unigene=Hs.719980 | ||
| + | |num_trans=17 | ||
| + | |species=human | ||
| + | |start=85741845 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000376083.7 uc010mqc.4 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101190.1 | |tss_id=hg_101190.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R288 Q9UPW5 | ||
}} | }} | ||
Revision as of 18:32, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000376083.7 uc010mqc.4 |
|---|---|
| Distance: | 28 |
| Num_trans: | 17 |
| All_trans: | ENST00000376083.7:28 uc010mqc.4:28 ENST00000357081.7:-36 uc064uax.1:-36 AB028958:-36 ENST00000376081.8:-38 uc064uaz.1:-38 AK001544:-124 BC060815:-144 ENST00000337006.8:-179 ENST00000628899.1:-179 NM_015239:-179 NM_001286715:-179 NM_001286717:-179 uc033czo.2:-179 uc011lte.3:-179 AK295774:-179 |
TATA-Box annotation
| Distance to TSS: | 181 |
|---|---|
| Nearest PromoterID: | NM_001286715 |
| Entrez ID: | 23287 |
| Nearest Unigene: | Hs.719980 |
| Nearest Refseq: | NM_015239 |
| Nearest Ensembl: | ENSG00000135049 |
| Gene Name: | ATP/GTP binding protein 1 |
| Gene Alias: | CCP1 |
| Gene Description: | ATP/GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
