Difference between revisions of "TSS:Hg 101322.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.035 |distance_to_tss=43304 |entrez_id=10507 |gc_percent=0.641791 |gene_alias=C9orf164|CD100|M-sema-G|SEMAJ|coll-4 |gene_description=semaphorin 4D |g...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CD100= | ||
| + | |M-sema-G= | ||
| + | |SEMAJ= | ||
| + | |all_trans=ENST00000418828.1:-67 uc064uey.1:-67 ENST00000420681.6:-87 uc064uev.1:-87 ENST00000482128.1:-182 uc064ufb.1:-182 | ||
| + | |chr=chr9 | ||
| + | |coll-4= | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| + | |distance=-67 | ||
|distance_to_tss=43304 | |distance_to_tss=43304 | ||
| + | |end=89436396 | ||
|entrez_id=10507 | |entrez_id=10507 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=C9orf164|CD100|M-sema-G|SEMAJ|coll-4 | |gene_alias=C9orf164|CD100|M-sema-G|SEMAJ|coll-4 | ||
|gene_description=semaphorin 4D | |gene_description=semaphorin 4D | ||
| − | |gene_name=SEMA4D | + | |gene_id=10507 |
| + | |gene_name=semaphorin 4D | ||
| + | |gene_source=HGNC:10732 | ||
| + | |gene_symbol=SEMA4D | ||
| + | |gene_synonyms=CD100 FLJ39737 coll-4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10732 | ||
|nearest_ensembl=ENSG00000187764 | |nearest_ensembl=ENSG00000187764 | ||
|nearest_promoter_id=NM_006378 | |nearest_promoter_id=NM_006378 | ||
|nearest_refseq=NM_006378 | |nearest_refseq=NM_006378 | ||
|nearest_unigene=Hs.494406 | |nearest_unigene=Hs.494406 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=89436387 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000418828.1 uc064uey.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101322.1 | |tss_id=hg_101322.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9JD54 | ||
}} | }} | ||
Revision as of 18:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000418828.1 uc064uey.1 |
|---|---|
| Distance: | -67 |
| Num_trans: | 6 |
| All_trans: | ENST00000418828.1:-67 uc064uey.1:-67 ENST00000420681.6:-87 uc064uev.1:-87 ENST00000482128.1:-182 uc064ufb.1:-182 |
TATA-Box annotation
| Distance to TSS: | 43304 |
|---|---|
| Nearest PromoterID: | NM_006378 |
| Entrez ID: | 10507 |
| Nearest Unigene: | Hs.494406 |
| Nearest Refseq: | NM_006378 |
| Nearest Ensembl: | ENSG00000187764 |
| Gene Name: | semaphorin 4D |
| Gene Alias: | C9orf164 |
| Gene Description: | semaphorin 4D |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
