Difference between revisions of "TSS:Hg 10133.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-31103 |entrez_id=106632271 |gc_percent=0.527363 |gene_alias=ZL43 |gene_description="small nucleolar RNA, C/D box 128" |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000464972.5:-6 uc057bzf.1:-6 ENST00000507012.1:-18 uc057bzi.1:-18 ENST00000377464.5:72 uc010nzx.2:72 AB384483:226 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| + | |distance=-6 | ||
|distance_to_tss=-31103 | |distance_to_tss=-31103 | ||
| + | |end=8526021 | ||
|entrez_id=106632271 | |entrez_id=106632271 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
|gene_alias=ZL43 | |gene_alias=ZL43 | ||
|gene_description="small nucleolar RNA, C/D box 128" | |gene_description="small nucleolar RNA, C/D box 128" | ||
| − | |gene_name= | + | |gene_id=473 |
| + | |gene_name=arginine-glutamic acid dipeptide (RE) repeats | ||
| + | |gene_source=HGNC:9965 | ||
| + | |gene_symbol=RERE | ||
| + | |gene_synonyms=ARG ARP DNB1 KIAA0458 | ||
|gene_type=snoRNA | |gene_type=snoRNA | ||
| + | |hgnc_mgi_id=HGNC:9965 | ||
|nearest_ensembl= | |nearest_ensembl= | ||
|nearest_promoter_id=NR_132752 | |nearest_promoter_id=NR_132752 | ||
|nearest_refseq=NR_132752 | |nearest_refseq=NR_132752 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=8526010 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000464972.5 uc057bzf.1 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10133.1 | |tss_id=hg_10133.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=K7EIE3 | ||
}} | }} | ||
Revision as of 18:38, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000464972.5 uc057bzf.1 |
|---|---|
| Distance: | -6 |
| Num_trans: | 7 |
| All_trans: | ENST00000464972.5:-6 uc057bzf.1:-6 ENST00000507012.1:-18 uc057bzi.1:-18 ENST00000377464.5:72 uc010nzx.2:72 AB384483:226 |
TATA-Box annotation
| Distance to TSS: | -31103 |
|---|---|
| Nearest PromoterID: | NR_132752 |
| Entrez ID: | 106632271 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_132752 |
| Nearest Ensembl: | |
| Gene Name: | arginine-glutamic acid dipeptide (RE) repeats |
| Gene Alias: | ZL43 |
| Gene Description: | "small nucleolar RNA, C/D box 128" |
| Gene Type: | snoRNA |
| CpG%: | 0.025 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
