Difference between revisions of "TSS:Hg 101333.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.185 |distance_to_tss=-18281 |entrez_id=10507 |gc_percent=0.860697 |gene_alias=C9orf164|CD100|M-sema-G|SEMAJ|coll-4 |gene_description=semaphorin 4D |...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |CD100= | ||
| + | |M-sema-G= | ||
| + | |SEMAJ= | ||
| + | |all_trans=BX648216:0 ENST00000339861.8:-56 uc064ueg.1:-56 ENST00000422704.6:-107 uc064ueq.1:-107 ENST00000455551.6:-148 uc064uel.1:-148 | ||
| + | |chr=chr9 | ||
| + | |coll-4= | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
| + | |distance=0 | ||
|distance_to_tss=-18281 | |distance_to_tss=-18281 | ||
| + | |end=89497982 | ||
|entrez_id=10507 | |entrez_id=10507 | ||
|gc_percent=0.860697 | |gc_percent=0.860697 | ||
|gene_alias=C9orf164|CD100|M-sema-G|SEMAJ|coll-4 | |gene_alias=C9orf164|CD100|M-sema-G|SEMAJ|coll-4 | ||
|gene_description=semaphorin 4D | |gene_description=semaphorin 4D | ||
| − | |gene_name=SEMA4D | + | |gene_id=10507 |
| + | |gene_name=semaphorin 4D | ||
| + | |gene_source=HGNC:10732 | ||
| + | |gene_symbol=SEMA4D | ||
| + | |gene_synonyms=CD100 FLJ39737 coll-4 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10732 | ||
|nearest_ensembl=ENSG00000187764 | |nearest_ensembl=ENSG00000187764 | ||
|nearest_promoter_id=NM_001142287 | |nearest_promoter_id=NM_001142287 | ||
|nearest_refseq=NM_006378 | |nearest_refseq=NM_006378 | ||
|nearest_unigene=Hs.494406 | |nearest_unigene=Hs.494406 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=89497971 | ||
| + | |strand=- | ||
| + | |transcript_name=BX648216 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101333.1 | |tss_id=hg_101333.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 18:38, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX648216 |
|---|---|
| Distance: | 0 |
| Num_trans: | 7 |
| All_trans: | BX648216:0 ENST00000339861.8:-56 uc064ueg.1:-56 ENST00000422704.6:-107 uc064ueq.1:-107 ENST00000455551.6:-148 uc064uel.1:-148 |
TATA-Box annotation
| Distance to TSS: | -18281 |
|---|---|
| Nearest PromoterID: | NM_001142287 |
| Entrez ID: | 10507 |
| Nearest Unigene: | Hs.494406 |
| Nearest Refseq: | NM_006378 |
| Nearest Ensembl: | ENSG00000187764 |
| Gene Name: | semaphorin 4D |
| Gene Alias: | C9orf164 |
| Gene Description: | semaphorin 4D |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.860697 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
